EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0021750 (Gene tree)
Gene ID: -
Gene Symbol: Rbfox1
Alias: A2bp|A2bp1|FOX1|Fox1|HRNBP1|Hrnbp1|fox-1
Full Name: RNA binding protein%2C fox-1 homolog (C. elegans) 1
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 633357 bases
Position: chr16:3466958-4100314
Accession: 1926224
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0042852	Fox-1_C	PF12414.8	2e-42	1	1
MGP_CASTEiJ_P0042853	Fox-1_C	PF12414.8	2.3e-40	1	1
MGP_CASTEiJ_P0042853	RRM_1	PF00076.22	5.6e-18	1	1
MGP_CASTEiJ_P0042852	RRM_1	PF00076.22	5.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0042852	-	1191	XM_006522184	MGP_CASTEiJ_P0042852	396 (aa)	XP_006522247	Q9JJ43
MGP_CASTEiJ_T0042853	-	4086	-	MGP_CASTEiJ_P0042853	417 (aa)	-	-
MGP_CASTEiJ_T0042854	-	5666	-	MGP_CASTEiJ_P0042854	424 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0021750's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0021750's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0021750	Rbfox1	91	64.850	MGP_CASTEiJ_G0018773	Rbfox3	100	71.930
MGP_CASTEiJ_G0021750	Rbfox1	100	62.287	MGP_CASTEiJ_G0021279	Rbfox2	100	62.044