EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0022188 (Gene tree)
Gene ID: -
Gene Symbol: Arl6
Alias: 1110018H24Rik|2210411E14Rik|ARL6|BBS3|Bbs3
Full Name: ADP-ribosylation factor-like 6
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 29331 bases
Position: chr16:58649553-58678883
Accession: 1927136
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0044629	MMR_HSR1	PF01926.23	3e-06	1	1
MGP_CASTEiJ_P0044630	MMR_HSR1	PF01926.23	3.3e-06	1	1
MGP_CASTEiJ_P0044631	MMR_HSR1	PF01926.23	3.3e-06	1	1
MGP_CASTEiJ_P0044632	MMR_HSR1	PF01926.23	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0044632	-	811	-	MGP_CASTEiJ_P0044632	194 (aa)	-	-
MGP_CASTEiJ_T0044630	-	1555	-	MGP_CASTEiJ_P0044630	193 (aa)	-	-
MGP_CASTEiJ_T0044631	-	876	-	MGP_CASTEiJ_P0044631	193 (aa)	-	-
MGP_CASTEiJ_T0044629	-	1697	XM_006522398	MGP_CASTEiJ_P0044629	186 (aa)	XP_006522461	O88848

Gene Model

Click here to download MGP_CASTEiJ_G0022188's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0022188's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0022188	Arl6	98	38.043	MGP_CASTEiJ_G0018355	Arl5c	99	38.043
MGP_CASTEiJ_G0022188	Arl6	97	37.433	MGP_CASTEiJ_G0019000	Arl4a	92	37.433
MGP_CASTEiJ_G0022188	Arl6	54	37.143	MGP_CASTEiJ_G0017591	Sar1b	52	37.143
MGP_CASTEiJ_G0022188	Arl6	85	32.075	MGP_CASTEiJ_G0015866	Arl8a	82	32.075
MGP_CASTEiJ_G0022188	Arl6	85	32.704	MGP_CASTEiJ_G0030189	Arl8b	82	32.704
MGP_CASTEiJ_G0022188	Arl6	91	36.471	MGP_CASTEiJ_G0016961	Arl1	93	36.313
MGP_CASTEiJ_G0022188	Arl6	89	39.157	MGP_CASTEiJ_G0024562	Arl5b	92	39.506
MGP_CASTEiJ_G0022188	Arl6	98	35.519	MGP_CASTEiJ_G0023957	Arl2	97	35.519
MGP_CASTEiJ_G0022188	Arl6	99	36.216	MGP_CASTEiJ_G0024407	Arl3	99	36.216
MGP_CASTEiJ_G0022188	Arl6	90	36.527	MGP_CASTEiJ_G0029606	Arf5	91	36.527
MGP_CASTEiJ_G0022188	Arl6	61	31.579	MGP_CASTEiJ_G0019834	Arl10	53	31.579
MGP_CASTEiJ_G0022188	Arl6	92	30.387	MGP_CASTEiJ_G0026195	Arfrp1	93	33.929
MGP_CASTEiJ_G0022188	Arl6	88	33.537	MGP_CASTEiJ_G0020697	Arl11	91	33.537
MGP_CASTEiJ_G0022188	Arl6	99	30.851	MGP_CASTEiJ_G0026458	Arl14	94	30.851
MGP_CASTEiJ_G0022188	Arl6	92	35.870	MGP_CASTEiJ_G0015639	Arl4c	94	35.870
MGP_CASTEiJ_G0022188	Arl6	96	41.341	MGP_CASTEiJ_G0021565	Arf3	96	41.341