EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CASTEiJ_G0022282 (Gene tree)
Gene ID
-
Gene Symbol
Synj1
Alias
A930006D20Rik|AA675315|mKIAA0910
Full Name
synaptojanin 1
Gene Type
protein_coding
Species
Mus_musculus_casteij
Status
putative
Strand
Minus strand
Length
79036 bases
Position
chr16:91379517-91458552
Accession
1354961
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CASTEiJ_P0044881Exo_endo_phosPF03372.231.1e-1411
MGP_CASTEiJ_P0044883Exo_endo_phosPF03372.231.1e-1411
MGP_CASTEiJ_P0044880Exo_endo_phosPF03372.231.5e-1411
MGP_CASTEiJ_P0044888Exo_endo_phosPF03372.232.6e-0711
MGP_CASTEiJ_P0044881DUF1866PF08952.111.8e-5711
MGP_CASTEiJ_P0044883DUF1866PF08952.111.8e-5711
MGP_CASTEiJ_P0044880DUF1866PF08952.112.1e-5711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CASTEiJ_T0044881-7018-MGP_CASTEiJ_P00448811309 (aa)--
MGP_CASTEiJ_T0044880-7081XM_006522837MGP_CASTEiJ_P00448801607 (aa)XP_006522900D3Z1M7
MGP_CASTEiJ_T0044883-4771-MGP_CASTEiJ_P00448831323 (aa)--
MGP_CASTEiJ_T0044882-3492-MGP_CASTEiJ_P0044882188 (aa)--
MGP_CASTEiJ_T0044885-547-MGP_CASTEiJ_P0044885103 (aa)--
MGP_CASTEiJ_T0044884-772--- (aa)--
MGP_CASTEiJ_T0044887-2758--- (aa)--
MGP_CASTEiJ_T0044886-354-MGP_CASTEiJ_P0044886117 (aa)--
MGP_CASTEiJ_T0044889-962--- (aa)--
MGP_CASTEiJ_T0044888-2204-MGP_CASTEiJ_P0044888693 (aa)--
Gene Model
Click here to download MGP_CASTEiJ_G0022282's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0022282's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CASTEiJ_G0022282Synj110059.914MGP_CASTEiJ_G0022359Synj29959.581

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