EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0022472 (Gene tree)
Gene ID: -
Gene Symbol: Gm10226
Alias: -
Full Name: predicted gene 10226
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 2128 bases
Position: chr17:19840830-19842957
Accession: 3704470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0045546	zf-C2H2	PF00096.26	3.7e-22	1	3
MGP_CASTEiJ_P0045546	zf-C2H2	PF00096.26	3.7e-22	2	3
MGP_CASTEiJ_P0045546	zf-C2H2	PF00096.26	3.7e-22	3	3
MGP_CASTEiJ_P0045546	zf-met	PF12874.7	3.6e-07	1	2
MGP_CASTEiJ_P0045546	zf-met	PF12874.7	3.6e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0045546	-	255	-	MGP_CASTEiJ_P0045546	85 (aa)	-	O88253

Gene Model

Click here to download MGP_CASTEiJ_G0022472's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0022472's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0022472	Gm10226	100	60.000	MGP_CASTEiJ_G0019990	Zfp493	53	60.000
MGP_CASTEiJ_G0022472	Gm10226	100	47.561	MGP_CASTEiJ_G0028615	Zbtb49	60	45.588
MGP_CASTEiJ_G0022472	Gm10226	100	94.118	MGP_CASTEiJ_G0022467	Zfp51	79	94.118
MGP_CASTEiJ_G0022472	Gm10226	100	58.333	MGP_CASTEiJ_G0030265	Zfp637	57	58.333
MGP_CASTEiJ_G0022472	Gm10226	100	50.000	MGP_CASTEiJ_G0017666	Zfp672	90	42.373
MGP_CASTEiJ_G0022472	Gm10226	100	50.000	MGP_CASTEiJ_G0030646	Zfp784	71	50.000
MGP_CASTEiJ_G0022472	Gm10226	100	48.193	MGP_CASTEiJ_G0029798	Repin1	55	46.341