EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0022543 (Gene tree)
Gene ID: -
Gene Symbol: Tbl3
Alias: 9430070M15Rik
Full Name: transducin (beta)-like 3
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 14072 bases
Position: chr17:23353949-23368020
Accession: 2384863
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0045778	Utp13	PF08625.11	5.6e-39	1	1
MGP_CASTEiJ_P0045788	Utp13	PF08625.11	5.3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0045789	-	611	-	-	- (aa)	-	-
MGP_CASTEiJ_T0045788	-	896	-	MGP_CASTEiJ_P0045788	298 (aa)	-	-
MGP_CASTEiJ_T0045778	-	5234	-	MGP_CASTEiJ_P0045778	802 (aa)	-	Q8C4J7
MGP_CASTEiJ_T0045790	-	852	-	-	- (aa)	-	-
MGP_CASTEiJ_T0045787	-	2770	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0022543's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0022543's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0022543	Tbl3	71	32.000	MGP_CASTEiJ_G0022036	Wdr5b	92	32.000
MGP_CASTEiJ_G0022543	Tbl3	55	33.121	MGP_CASTEiJ_G0033834	Wdr61	63	33.121
MGP_CASTEiJ_G0022543	Tbl3	71	31.452	MGP_CASTEiJ_G0024712	Wdr5	99	31.452
MGP_CASTEiJ_G0022543	Tbl3	55	30.714	MGP_CASTEiJ_G0025633	Ciao1	84	32.331
MGP_CASTEiJ_G0022543	Tbl3	66	30.539	MGP_CASTEiJ_G0027486	Prpf4	56	33.673