EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0022763 (Gene tree)
Gene ID: -
Gene Symbol: Rab11b
Alias: A730055L17Rik|RAB11B|Rab11BGN
Full Name: RAB11B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 20414 bases
Position: chr17:33354071-33374484
Accession: 99425
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0046699	MMR_HSR1	PF01926.23	5.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0046699	-	5187	XM_011246326	MGP_CASTEiJ_P0046699	218 (aa)	XP_006523950	P46638
MGP_CASTEiJ_T0046700	-	503	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0022763's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0022763's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0022763	Rab11b	99	45.581	MGP_CASTEiJ_G0017380	Rab1a	100	45.581
MGP_CASTEiJ_G0022763	Rab11b	77	40.476	MGP_CASTEiJ_G0023184	Rab31	86	40.476
MGP_CASTEiJ_G0022763	Rab11b	81	40.331	MGP_CASTEiJ_G0034658	Rab33a	75	40.331
MGP_CASTEiJ_G0022763	Rab11b	72	32.278	MGP_CASTEiJ_G0034164	Mras	81	34.706
MGP_CASTEiJ_G0022763	Rab11b	75	34.146	MGP_CASTEiJ_G0028465	Rheb	89	34.146
MGP_CASTEiJ_G0022763	Rab11b	76	41.916	MGP_CASTEiJ_G0023193	Rab12	70	37.736
MGP_CASTEiJ_G0022763	Rab11b	55	30.894	MGP_CASTEiJ_G0019000	Arl4a	60	30.894
MGP_CASTEiJ_G0022763	Rab11b	96	39.524	MGP_CASTEiJ_G0031541	Rab30	97	39.524
MGP_CASTEiJ_G0022763	Rab11b	81	40.110	MGP_CASTEiJ_G0035224	Rab9	87	40.110
MGP_CASTEiJ_G0022763	Rab11b	78	39.773	MGP_CASTEiJ_G0026366	Rab33b	76	39.773
MGP_CASTEiJ_G0022763	Rab11b	68	35.333	MGP_CASTEiJ_G0032241	Hras	85	36.420
MGP_CASTEiJ_G0022763	Rab11b	72	42.675	MGP_CASTEiJ_G0026136	Rab22a	81	42.675
MGP_CASTEiJ_G0022763	Rab11b	80	44.000	MGP_CASTEiJ_G0019160	Rab15	82	44.000
MGP_CASTEiJ_G0022763	Rab11b	74	35.404	MGP_CASTEiJ_G0034188	Rab6b	77	35.404
MGP_CASTEiJ_G0022763	Rab11b	70	36.129	MGP_CASTEiJ_G0026847	Nras	95	37.241
MGP_CASTEiJ_G0022763	Rab11b	72	40.491	MGP_CASTEiJ_G0030093	Rab7	91	45.833
MGP_CASTEiJ_G0022763	Rab11b	88	33.508	MGP_CASTEiJ_G0015254	Rab23	80	33.508
MGP_CASTEiJ_G0022763	Rab11b	96	48.095	MGP_CASTEiJ_G0023899	Rab1b	99	48.095
MGP_CASTEiJ_G0022763	Rab11b	65	30.986	MGP_CASTEiJ_G0015866	Arl8a	72	30.986
MGP_CASTEiJ_G0022763	Rab11b	74	47.531	MGP_CASTEiJ_G0023338	Rab18	78	47.531
MGP_CASTEiJ_G0022763	Rab11b	94	43.627	MGP_CASTEiJ_G0017200	Rab5b	90	43.627
MGP_CASTEiJ_G0022763	Rab11b	88	51.309	MGP_CASTEiJ_G0020554	Rab2b	95	51.309
MGP_CASTEiJ_G0022763	Rab11b	75	44.578	MGP_CASTEiJ_G0018675	Rab37	77	44.578
MGP_CASTEiJ_G0022763	Rab11b	94	41.667	MGP_CASTEiJ_G0023094	Rab5a	90	41.667
MGP_CASTEiJ_G0022763	Rab11b	80	52.299	MGP_CASTEiJ_G0024846	Rab14	99	53.691
MGP_CASTEiJ_G0022763	Rab11b	77	41.040	MGP_CASTEiJ_G0035073	Rab9b	86	41.040
MGP_CASTEiJ_G0022763	Rab11b	100	90.367	MGP_CASTEiJ_G0033947	Rab11a	100	96.078
MGP_CASTEiJ_G0022763	Rab11b	100	61.435	MGP_CASTEiJ_G0026561	Rab25	100	61.435
MGP_CASTEiJ_G0022763	Rab11b	78	34.426	MGP_CASTEiJ_G0018075	Rab34	70	33.880
MGP_CASTEiJ_G0022763	Rab11b	96	43.062	MGP_CASTEiJ_G0029079	Rab35	99	43.062
MGP_CASTEiJ_G0022763	Rab11b	78	55.556	MGP_CASTEiJ_G0027193	Rab2a	81	55.556
MGP_CASTEiJ_G0022763	Rab11b	74	48.447	MGP_CASTEiJ_G0018472	Rab5c	75	48.447
MGP_CASTEiJ_G0022763	Rab11b	78	32.941	MGP_CASTEiJ_G0030551	Kras	93	34.066
MGP_CASTEiJ_G0022763	Rab11b	72	36.943	MGP_CASTEiJ_G0021498	Rabl2	69	36.943
MGP_CASTEiJ_G0022763	Rab11b	79	47.126	MGP_CASTEiJ_G0034827	Rab39b	82	47.126
MGP_CASTEiJ_G0022763	Rab11b	94	34.123	MGP_CASTEiJ_G0016681	Rab36	79	34.123