EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0022816 (Gene tree)
Gene ID: -
Gene Symbol: Skiv2l
Alias: 4930534J06Rik|AW214248|Ddx13|SKI|Ski2w
Full Name: superkiller viralicidic activity 2-like (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 10989 bases
Position: chr17:34663395-34674383
Accession: 1099835
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0046964	rRNA_proc-arch	PF13234.6	1.7e-41	1	1
MGP_CASTEiJ_P0046968	rRNA_proc-arch	PF13234.6	1.2e-17	1	2
MGP_CASTEiJ_P0046968	rRNA_proc-arch	PF13234.6	1.2e-17	2	2
MGP_CASTEiJ_P0046964	DEAD	PF00270.29	1.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0046972	-	881	-	MGP_CASTEiJ_P0046972	92 (aa)	-	-
MGP_CASTEiJ_T0046971	-	832	-	-	- (aa)	-	-
MGP_CASTEiJ_T0046963	-	4005	-	-	- (aa)	-	-
MGP_CASTEiJ_T0046964	-	3951	-	MGP_CASTEiJ_P0046964	1244 (aa)	-	-
MGP_CASTEiJ_T0046965	-	3881	-	-	- (aa)	-	-
MGP_CASTEiJ_T0046966	-	4336	-	-	- (aa)	-	-
MGP_CASTEiJ_T0046967	-	462	-	-	- (aa)	-	-
MGP_CASTEiJ_T0046968	-	727	-	MGP_CASTEiJ_P0046968	242 (aa)	-	-
MGP_CASTEiJ_T0046969	-	817	-	-	- (aa)	-	-
MGP_CASTEiJ_T0046970	-	813	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0022816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0022816's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0022816	Skiv2l	76	37.279	MGP_CASTEiJ_G0020200	Skiv2l2	88	37.279