EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0023193 (Gene tree)
Gene ID: -
Gene Symbol: Rab12
Alias: 2900054P15Rik|AW555448|C77700
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 24973 bases
Position: chr17:68827601-68852573
Accession: 894284
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0048196	MMR_HSR1	PF01926.23	5.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0048197	-	630	-	-	- (aa)	-	-
MGP_CASTEiJ_T0048196	-	2054	-	MGP_CASTEiJ_P0048196	291 (aa)	-	P35283
MGP_CASTEiJ_T0048199	-	658	-	-	- (aa)	-	-
MGP_CASTEiJ_T0048198	-	381	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0023193's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0023193's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0023193	Rab12	56	35.329	MGP_CASTEiJ_G0035073	Rab9b	83	35.329
MGP_CASTEiJ_G0023193	Rab12	69	39.500	MGP_CASTEiJ_G0020554	Rab2b	80	47.097
MGP_CASTEiJ_G0023193	Rab12	54	38.462	MGP_CASTEiJ_G0023184	Rab31	79	38.462
MGP_CASTEiJ_G0023193	Rab12	55	37.107	MGP_CASTEiJ_G0026136	Rab22a	81	37.107
MGP_CASTEiJ_G0023193	Rab12	53	34.194	MGP_CASTEiJ_G0021498	Rabl2	67	34.194
MGP_CASTEiJ_G0023193	Rab12	70	37.799	MGP_CASTEiJ_G0033947	Rab11a	90	43.796
MGP_CASTEiJ_G0023193	Rab12	52	31.373	MGP_CASTEiJ_G0030551	Kras	87	31.325
MGP_CASTEiJ_G0023193	Rab12	54	40.385	MGP_CASTEiJ_G0034188	Rab6b	75	40.385
MGP_CASTEiJ_G0023193	Rab12	73	33.023	MGP_CASTEiJ_G0018075	Rab34	77	33.023
MGP_CASTEiJ_G0023193	Rab12	53	31.210	MGP_CASTEiJ_G0034164	Mras	80	31.548
MGP_CASTEiJ_G0023193	Rab12	58	40.588	MGP_CASTEiJ_G0026561	Rab25	79	40.588
MGP_CASTEiJ_G0023193	Rab12	55	42.593	MGP_CASTEiJ_G0018675	Rab37	75	43.210
MGP_CASTEiJ_G0023193	Rab12	54	30.818	MGP_CASTEiJ_G0028465	Rheb	85	30.818
MGP_CASTEiJ_G0023193	Rab12	58	49.704	MGP_CASTEiJ_G0023899	Rab1b	84	49.704
MGP_CASTEiJ_G0023193	Rab12	66	36.869	MGP_CASTEiJ_G0026366	Rab33b	83	36.224
MGP_CASTEiJ_G0023193	Rab12	64	36.316	MGP_CASTEiJ_G0030093	Rab7	90	50.704
MGP_CASTEiJ_G0023193	Rab12	62	42.308	MGP_CASTEiJ_G0027193	Rab2a	85	42.308
MGP_CASTEiJ_G0023193	Rab12	63	35.326	MGP_CASTEiJ_G0017200	Rab5b	85	35.326
MGP_CASTEiJ_G0023193	Rab12	57	42.262	MGP_CASTEiJ_G0034827	Rab39b	78	42.262
MGP_CASTEiJ_G0023193	Rab12	62	47.778	MGP_CASTEiJ_G0031541	Rab30	88	47.778
MGP_CASTEiJ_G0023193	Rab12	70	37.736	MGP_CASTEiJ_G0022763	Rab11b	76	41.916
MGP_CASTEiJ_G0023193	Rab12	56	49.697	MGP_CASTEiJ_G0023338	Rab18	79	49.697
MGP_CASTEiJ_G0023193	Rab12	52	30.464	MGP_CASTEiJ_G0026847	Nras	97	30.405
MGP_CASTEiJ_G0023193	Rab12	62	37.989	MGP_CASTEiJ_G0023094	Rab5a	81	37.989
MGP_CASTEiJ_G0023193	Rab12	63	37.696	MGP_CASTEiJ_G0034658	Rab33a	68	41.104
MGP_CASTEiJ_G0023193	Rab12	57	35.119	MGP_CASTEiJ_G0015254	Rab23	69	35.119
MGP_CASTEiJ_G0023193	Rab12	75	36.000	MGP_CASTEiJ_G0018472	Rab5c	86	38.806
MGP_CASTEiJ_G0023193	Rab12	67	37.755	MGP_CASTEiJ_G0024846	Rab14	96	40.000
MGP_CASTEiJ_G0023193	Rab12	58	50.296	MGP_CASTEiJ_G0017380	Rab1a	82	50.296
MGP_CASTEiJ_G0023193	Rab12	72	43.396	MGP_CASTEiJ_G0019160	Rab15	88	45.213
MGP_CASTEiJ_G0023193	Rab12	59	45.614	MGP_CASTEiJ_G0029079	Rab35	94	43.455
MGP_CASTEiJ_G0023193	Rab12	69	30.583	MGP_CASTEiJ_G0035224	Rab9	83	34.132