EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0023258 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpll
Alias: 2510028H02Rik|2810036L13Rik|AI256697|AI852082|Hnrpll
Full Name: heterogeneous nuclear ribonucleoprotein L-like
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 33440 bases
Position: chr17:83175739-83209178
Accession: 1919942
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0048405	RRM_5	PF13893.6	8.2e-62	1	2
MGP_CASTEiJ_P0048405	RRM_5	PF13893.6	8.2e-62	2	2
MGP_CASTEiJ_P0048406	RRM_5	PF13893.6	8.2e-62	1	2
MGP_CASTEiJ_P0048406	RRM_5	PF13893.6	8.2e-62	2	2
MGP_CASTEiJ_P0048405	RRM_1	PF00076.22	2.5e-21	1	2
MGP_CASTEiJ_P0048405	RRM_1	PF00076.22	2.5e-21	2	2
MGP_CASTEiJ_P0048406	RRM_1	PF00076.22	2.5e-21	1	2
MGP_CASTEiJ_P0048406	RRM_1	PF00076.22	2.5e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0048405	-	3120	-	MGP_CASTEiJ_P0048405	594 (aa)	-	Q921F4
MGP_CASTEiJ_T0048407	-	2746	-	MGP_CASTEiJ_P0048407	334 (aa)	-	-
MGP_CASTEiJ_T0048410	-	4690	-	-	- (aa)	-	-
MGP_CASTEiJ_T0048406	-	3013	-	MGP_CASTEiJ_P0048406	594 (aa)	-	-
MGP_CASTEiJ_T0048409	-	2774	-	-	- (aa)	-	-
MGP_CASTEiJ_T0048408	-	1863	-	-	- (aa)	-	-
MGP_CASTEiJ_T0048411	-	3030	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0023258's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0023258's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0023258	Hnrnpll	79	58.065	MGP_CASTEiJ_G0031001	Hnrnpl	100	63.393
MGP_CASTEiJ_G0023258	Hnrnpll	66	30.159	MGP_CASTEiJ_G0026983	Ptbp2	99	30.357