EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0023263 (Gene tree)
Gene ID: -
Gene Symbol: Dhx57
Alias: AW494914
Full Name: DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 50928 bases
Position: chr17:83412009-83462936
Accession: 2147067
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0048419	zf-CCCH	PF00642.24	3.7e-06	1	1
MGP_CASTEiJ_P0048420	zf-CCCH	PF00642.24	3.8e-06	1	1
MGP_CASTEiJ_P0048419	DEAD	PF00270.29	2.4e-10	1	1
MGP_CASTEiJ_P0048420	DEAD	PF00270.29	2.5e-10	1	1
MGP_CASTEiJ_P0048419	HA2	PF04408.23	2.7e-17	1	1
MGP_CASTEiJ_P0048420	HA2	PF04408.23	2.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0048420	-	5077	-	MGP_CASTEiJ_P0048420	1388 (aa)	-	-
MGP_CASTEiJ_T0048419	-	4918	XM_006523447	MGP_CASTEiJ_P0048419	1335 (aa)	XP_006523510	Q6P5D3

Gene Model

Click here to download MGP_CASTEiJ_G0023263's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0023263's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0023263	Dhx57	50	39.320	MGP_CASTEiJ_G0033118	Dhx38	50	39.320
MGP_CASTEiJ_G0023263	Dhx57	67	41.704	MGP_CASTEiJ_G0026427	Dhx36	83	41.593
MGP_CASTEiJ_G0023263	Dhx57	55	50.800	MGP_CASTEiJ_G0023610	Ythdc2	72	36.504
MGP_CASTEiJ_G0023263	Dhx57	69	32.051	MGP_CASTEiJ_G0034331	Dhx30	61	33.492
MGP_CASTEiJ_G0023263	Dhx57	65	39.771	MGP_CASTEiJ_G0020201	Dhx29	59	39.590
MGP_CASTEiJ_G0023263	Dhx57	50	41.148	MGP_CASTEiJ_G0025980	Dhx35	89	41.148
MGP_CASTEiJ_G0023263	Dhx57	50	40.201	MGP_CASTEiJ_G0018516	Dhx8	50	44.860
MGP_CASTEiJ_G0023263	Dhx57	63	35.681	MGP_CASTEiJ_G0015943	Dhx9	54	35.915