EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0023338 (Gene tree)
Gene ID: -
Gene Symbol: Rab18
Alias: AA959686
Full Name: RAB18%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 29678 bases
Position: chr18:3652992-3682669
Accession: 102790
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0048710	MMR_HSR1	PF01926.23	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0048711	-	399	-	MGP_CASTEiJ_P0048711	93 (aa)	-	-
MGP_CASTEiJ_T0048710	-	2254	XM_011246861	MGP_CASTEiJ_P0048710	206 (aa)	-	P35293

Gene Model

Click here to download MGP_CASTEiJ_G0023338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0023338's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0023338	Rab18	96	31.313	MGP_CASTEiJ_G0032241	Hras	95	31.414
MGP_CASTEiJ_G0023338	Rab18	95	39.796	MGP_CASTEiJ_G0026136	Rab22a	99	39.796
MGP_CASTEiJ_G0023338	Rab18	78	45.062	MGP_CASTEiJ_G0018675	Rab37	75	45.062
MGP_CASTEiJ_G0023338	Rab18	93	38.462	MGP_CASTEiJ_G0017200	Rab5b	90	38.462
MGP_CASTEiJ_G0023338	Rab18	96	33.495	MGP_CASTEiJ_G0021498	Rabl2	89	33.495
MGP_CASTEiJ_G0023338	Rab18	88	40.541	MGP_CASTEiJ_G0023184	Rab31	92	40.541
MGP_CASTEiJ_G0023338	Rab18	89	47.872	MGP_CASTEiJ_G0020554	Rab2b	86	47.872
MGP_CASTEiJ_G0023338	Rab18	78	47.531	MGP_CASTEiJ_G0022763	Rab11b	74	47.531
MGP_CASTEiJ_G0023338	Rab18	82	47.929	MGP_CASTEiJ_G0031541	Rab30	83	47.929
MGP_CASTEiJ_G0023338	Rab18	82	43.529	MGP_CASTEiJ_G0026561	Rab25	79	43.529
MGP_CASTEiJ_G0023338	Rab18	84	48.851	MGP_CASTEiJ_G0029079	Rab35	95	46.632
MGP_CASTEiJ_G0023338	Rab18	79	49.390	MGP_CASTEiJ_G0024846	Rab14	89	48.529
MGP_CASTEiJ_G0023338	Rab18	93	37.755	MGP_CASTEiJ_G0026366	Rab33b	85	37.755
MGP_CASTEiJ_G0023338	Rab18	94	38.119	MGP_CASTEiJ_G0034188	Rab6b	95	38.119
MGP_CASTEiJ_G0023338	Rab18	93	36.923	MGP_CASTEiJ_G0035224	Rab9	97	36.923
MGP_CASTEiJ_G0023338	Rab18	83	35.465	MGP_CASTEiJ_G0015254	Rab23	72	35.465
MGP_CASTEiJ_G0023338	Rab18	93	40.816	MGP_CASTEiJ_G0023094	Rab5a	90	40.816
MGP_CASTEiJ_G0023338	Rab18	93	45.361	MGP_CASTEiJ_G0017380	Rab1a	94	45.361
MGP_CASTEiJ_G0023338	Rab18	81	33.133	MGP_CASTEiJ_G0026847	Nras	99	31.544
MGP_CASTEiJ_G0023338	Rab18	95	36.181	MGP_CASTEiJ_G0035073	Rab9b	96	36.181
MGP_CASTEiJ_G0023338	Rab18	93	44.845	MGP_CASTEiJ_G0023899	Rab1b	96	44.845
MGP_CASTEiJ_G0023338	Rab18	78	45.062	MGP_CASTEiJ_G0018472	Rab5c	75	45.062
MGP_CASTEiJ_G0023338	Rab18	82	44.706	MGP_CASTEiJ_G0019160	Rab15	79	44.706
MGP_CASTEiJ_G0023338	Rab18	83	39.884	MGP_CASTEiJ_G0034827	Rab39b	81	39.884
MGP_CASTEiJ_G0023338	Rab18	87	50.000	MGP_CASTEiJ_G0027193	Rab2a	97	47.368
MGP_CASTEiJ_G0023338	Rab18	92	36.082	MGP_CASTEiJ_G0030093	Rab7	90	48.864
MGP_CASTEiJ_G0023338	Rab18	56	38.793	MGP_CASTEiJ_G0016681	Rab36	60	33.750
MGP_CASTEiJ_G0023338	Rab18	97	39.423	MGP_CASTEiJ_G0034658	Rab33a	88	39.423
MGP_CASTEiJ_G0023338	Rab18	76	32.716	MGP_CASTEiJ_G0028465	Rheb	85	32.716
MGP_CASTEiJ_G0023338	Rab18	81	35.119	MGP_CASTEiJ_G0034164	Mras	95	33.498
MGP_CASTEiJ_G0023338	Rab18	81	33.133	MGP_CASTEiJ_G0030551	Kras	87	33.537
MGP_CASTEiJ_G0023338	Rab18	79	49.697	MGP_CASTEiJ_G0023193	Rab12	56	49.697
MGP_CASTEiJ_G0023338	Rab18	78	47.531	MGP_CASTEiJ_G0033947	Rab11a	93	48.252
MGP_CASTEiJ_G0023338	Rab18	79	34.731	MGP_CASTEiJ_G0018866	Dnajc27	61	34.731