EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0023416 (Gene tree)
Gene ID: -
Gene Symbol: Celf4
Alias: A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik
Full Name: CUGBP%2C Elav-like family member 4
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 282842 bases
Position: chr18:23043397-23326238
Accession: 1932407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0048932	RRM_1	PF00076.22	7.5e-53	1	3
MGP_CASTEiJ_P0048932	RRM_1	PF00076.22	7.5e-53	2	3
MGP_CASTEiJ_P0048932	RRM_1	PF00076.22	7.5e-53	3	3
MGP_CASTEiJ_P0048931	RRM_1	PF00076.22	6.4e-43	1	3
MGP_CASTEiJ_P0048931	RRM_1	PF00076.22	6.4e-43	2	3
MGP_CASTEiJ_P0048931	RRM_1	PF00076.22	6.4e-43	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0048931	-	3921	-	MGP_CASTEiJ_P0048931	484 (aa)	-	-
MGP_CASTEiJ_T0048930	-	3503	XM_006525504	MGP_CASTEiJ_P0048930	453 (aa)	XP_006525571	Q7TSY6
MGP_CASTEiJ_T0048932	-	3981	-	MGP_CASTEiJ_P0048932	504 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0023416's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0023416's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0023416	Celf4	91	35.802	MGP_CASTEiJ_G0027708	Elavl4	88	38.272
MGP_CASTEiJ_G0023416	Celf4	100	42.430	MGP_CASTEiJ_G0025323	Celf1	100	45.200
MGP_CASTEiJ_G0023416	Celf4	68	40.789	MGP_CASTEiJ_G0034390	Rbms3	72	40.789
MGP_CASTEiJ_G0023416	Celf4	96	45.992	MGP_CASTEiJ_G0024528	Celf2	90	55.556
MGP_CASTEiJ_G0023416	Celf4	63	30.682	MGP_CASTEiJ_G0030063	Tia1	87	32.911
MGP_CASTEiJ_G0023416	Celf4	51	41.558	MGP_CASTEiJ_G0024960	Rbms1	52	42.105
MGP_CASTEiJ_G0023416	Celf4	53	32.886	MGP_CASTEiJ_G0025058	Rbm45	89	30.693
MGP_CASTEiJ_G0023416	Celf4	91	37.037	MGP_CASTEiJ_G0027579	Elavl2	88	39.506
MGP_CASTEiJ_G0023416	Celf4	67	39.744	MGP_CASTEiJ_G0033478	Elavl3	70	39.506
MGP_CASTEiJ_G0023416	Celf4	99	67.066	MGP_CASTEiJ_G0033906	Celf6	100	67.200
MGP_CASTEiJ_G0023416	Celf4	97	65.795	MGP_CASTEiJ_G0016890	Celf5	93	76.842
MGP_CASTEiJ_G0023416	Celf4	97	66.109	MGP_CASTEiJ_G0026707	Celf3	100	69.072
MGP_CASTEiJ_G0023416	Celf4	62	36.842	MGP_CASTEiJ_G0022384	Pabpc6	62	36.842