EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0023610 (Gene tree)
Gene ID: -
Gene Symbol: Ythdc2
Alias: 3010002F02Rik|BC037178
Full Name: YTH domain containing 2
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 68385 bases
Position: chr18:43241939-43310323
Accession: 2448561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0049399	R3H	PF01424.22	1.5e-10	1	1
MGP_CASTEiJ_P0049399	DEAD	PF00270.29	2.6e-09	1	1
MGP_CASTEiJ_P0049399	YTH	PF04146.15	1.3e-42	1	1
MGP_CASTEiJ_P0049399	HA2	PF04408.23	6.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0049401	-	1333	-	-	- (aa)	-	-
MGP_CASTEiJ_T0049402	-	4292	-	MGP_CASTEiJ_P0049402	585 (aa)	-	-
MGP_CASTEiJ_T0049403	-	423	-	-	- (aa)	-	-
MGP_CASTEiJ_T0049400	-	1083	-	MGP_CASTEiJ_P0049400	311 (aa)	-	-
MGP_CASTEiJ_T0049399	-	7217	-	MGP_CASTEiJ_P0049399	1445 (aa)	-	B2RR83

Gene Model

Click here to download MGP_CASTEiJ_G0023610's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0023610's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0023610	Ythdc2	69	31.785	MGP_CASTEiJ_G0028651	Dhx15	80	41.262
MGP_CASTEiJ_G0023610	Ythdc2	70	35.392	MGP_CASTEiJ_G0034331	Dhx30	55	47.236
MGP_CASTEiJ_G0023610	Ythdc2	90	35.912	MGP_CASTEiJ_G0015943	Dhx9	56	47.685
MGP_CASTEiJ_G0023610	Ythdc2	88	36.015	MGP_CASTEiJ_G0026427	Dhx36	80	41.667
MGP_CASTEiJ_G0023610	Ythdc2	72	36.504	MGP_CASTEiJ_G0023263	Dhx57	55	50.800
MGP_CASTEiJ_G0023610	Ythdc2	89	32.714	MGP_CASTEiJ_G0020201	Dhx29	55	46.491