EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0023666 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 28426 bases
Position: chr18:59270627-59299052
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0049554	MMR_HSR1	PF01926.23	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0049554	-	2875	-	MGP_CASTEiJ_P0049554	410 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0023666's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0023666's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0023666	-	64	47.529	MGP_CASTEiJ_G0017532	Ifi47	62	47.529
MGP_CASTEiJ_G0023666	-	68	55.036	MGP_CASTEiJ_G0017530	-	62	57.255
MGP_CASTEiJ_G0023666	-	72	75.850	MGP_CASTEiJ_G0023665	Gm4951	71	75.850
MGP_CASTEiJ_G0023666	-	71	53.872	MGP_CASTEiJ_G0023667	Gm4841	71	53.872
MGP_CASTEiJ_G0023666	-	62	39.370	MGP_CASTEiJ_G0030874	Irgc1	50	42.241
MGP_CASTEiJ_G0023666	-	55	36.000	MGP_CASTEiJ_G0017663	Irgm2	60	34.979
MGP_CASTEiJ_G0023666	-	60	35.341	MGP_CASTEiJ_G0017662	Igtp	57	35.341
MGP_CASTEiJ_G0023666	-	68	55.036	MGP_CASTEiJ_G0017529	-	80	60.000
MGP_CASTEiJ_G0023666	-	60	37.247	MGP_CASTEiJ_G0017524	Irgm1	84	37.247
MGP_CASTEiJ_G0023666	-	66	58.955	MGP_CASTEiJ_G0017525	-	59	63.063
MGP_CASTEiJ_G0023666	-	66	58.955	MGP_CASTEiJ_G0017526	-	59	63.063
MGP_CASTEiJ_G0023666	-	65	49.071	MGP_CASTEiJ_G0017527	9930111J21Rik2	54	51.406