EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0023809 (Gene tree)
Gene ID: -
Gene Symbol: Zfp236
Alias: AI447957|Gm335|LOC240456
Full Name: zinc finger protein 236
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 113570 bases
Position: chr18:82770291-82883860
Accession: 1926950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0050038	zf-C2H2	PF00096.26	2.4e-110	1	19
MGP_CASTEiJ_P0050038	zf-C2H2	PF00096.26	2.4e-110	2	19
MGP_CASTEiJ_P0050038	zf-C2H2	PF00096.26	2.4e-110	3	19
MGP_CASTEiJ_P0050038	zf-C2H2	PF00096.26	2.4e-110	4	19
MGP_CASTEiJ_P0050038	zf-C2H2	PF00096.26	2.4e-110	5	19
MGP_CASTEiJ_P0050038	zf-C2H2	PF00096.26	2.4e-110	6	19
MGP_CASTEiJ_P0050038	zf-C2H2	PF00096.26	2.4e-110	7	19
MGP_CASTEiJ_P0050038	zf-C2H2	PF00096.26	2.4e-110	8	19
MGP_CASTEiJ_P0050038	zf-C2H2	PF00096.26	2.4e-110	9	19
MGP_CASTEiJ_P0050038	zf-C2H2	PF00096.26	2.4e-110	10	19
MGP_CASTEiJ_P0050038	zf-C2H2	PF00096.26	2.4e-110	11	19
MGP_CASTEiJ_P0050038	zf-C2H2	PF00096.26	2.4e-110	12	19
MGP_CASTEiJ_P0050038	zf-C2H2	PF00096.26	2.4e-110	13	19
MGP_CASTEiJ_P0050038	zf-C2H2	PF00096.26	2.4e-110	14	19
MGP_CASTEiJ_P0050038	zf-C2H2	PF00096.26	2.4e-110	15	19
MGP_CASTEiJ_P0050038	zf-C2H2	PF00096.26	2.4e-110	16	19
MGP_CASTEiJ_P0050038	zf-C2H2	PF00096.26	2.4e-110	17	19
MGP_CASTEiJ_P0050038	zf-C2H2	PF00096.26	2.4e-110	18	19
MGP_CASTEiJ_P0050038	zf-C2H2	PF00096.26	2.4e-110	19	19
MGP_CASTEiJ_P0050035	zf-C2H2	PF00096.26	1.2e-107	1	18
MGP_CASTEiJ_P0050035	zf-C2H2	PF00096.26	1.2e-107	2	18
MGP_CASTEiJ_P0050035	zf-C2H2	PF00096.26	1.2e-107	3	18
MGP_CASTEiJ_P0050035	zf-C2H2	PF00096.26	1.2e-107	4	18
MGP_CASTEiJ_P0050035	zf-C2H2	PF00096.26	1.2e-107	5	18
MGP_CASTEiJ_P0050035	zf-C2H2	PF00096.26	1.2e-107	6	18
MGP_CASTEiJ_P0050035	zf-C2H2	PF00096.26	1.2e-107	7	18
MGP_CASTEiJ_P0050035	zf-C2H2	PF00096.26	1.2e-107	8	18
MGP_CASTEiJ_P0050035	zf-C2H2	PF00096.26	1.2e-107	9	18
MGP_CASTEiJ_P0050035	zf-C2H2	PF00096.26	1.2e-107	10	18
MGP_CASTEiJ_P0050035	zf-C2H2	PF00096.26	1.2e-107	11	18
MGP_CASTEiJ_P0050035	zf-C2H2	PF00096.26	1.2e-107	12	18
MGP_CASTEiJ_P0050035	zf-C2H2	PF00096.26	1.2e-107	13	18
MGP_CASTEiJ_P0050035	zf-C2H2	PF00096.26	1.2e-107	14	18
MGP_CASTEiJ_P0050035	zf-C2H2	PF00096.26	1.2e-107	15	18
MGP_CASTEiJ_P0050035	zf-C2H2	PF00096.26	1.2e-107	16	18
MGP_CASTEiJ_P0050035	zf-C2H2	PF00096.26	1.2e-107	17	18
MGP_CASTEiJ_P0050035	zf-C2H2	PF00096.26	1.2e-107	18	18
MGP_CASTEiJ_P0050041	zf-C2H2	PF00096.26	7e-06	1	1
MGP_CASTEiJ_P0050035	zf-met	PF12874.7	1.1e-06	1	4
MGP_CASTEiJ_P0050035	zf-met	PF12874.7	1.1e-06	2	4
MGP_CASTEiJ_P0050035	zf-met	PF12874.7	1.1e-06	3	4
MGP_CASTEiJ_P0050035	zf-met	PF12874.7	1.1e-06	4	4
MGP_CASTEiJ_P0050038	zf-met	PF12874.7	6.3e-06	1	4
MGP_CASTEiJ_P0050038	zf-met	PF12874.7	6.3e-06	2	4
MGP_CASTEiJ_P0050038	zf-met	PF12874.7	6.3e-06	3	4
MGP_CASTEiJ_P0050038	zf-met	PF12874.7	6.3e-06	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0050040	-	665	-	-	- (aa)	-	-
MGP_CASTEiJ_T0050035	-	9611	XM_006526490	MGP_CASTEiJ_P0050035	1799 (aa)	XP_006526553	B2RR24
MGP_CASTEiJ_T0050041	-	404	-	MGP_CASTEiJ_P0050041	65 (aa)	-	-
MGP_CASTEiJ_T0050037	-	2360	-	MGP_CASTEiJ_P0050037	715 (aa)	-	-
MGP_CASTEiJ_T0050036	-	3227	-	MGP_CASTEiJ_P0050036	42 (aa)	-	-
MGP_CASTEiJ_T0050039	-	6167	-	MGP_CASTEiJ_P0050039	485 (aa)	-	-
MGP_CASTEiJ_T0050038	-	6059	-	MGP_CASTEiJ_P0050038	1847 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0023809's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0023809's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0023809	Zfp236	67	43.103	MGP_CASTEiJ_G0028615	Zbtb49	62	47.887
MGP_CASTEiJ_G0023809	Zfp236	58	43.636	MGP_CASTEiJ_G0025790	Gzf1	58	56.000
MGP_CASTEiJ_G0023809	Zfp236	80	43.902	MGP_CASTEiJ_G0019963	Zfp759	97	41.837
MGP_CASTEiJ_G0023809	Zfp236	66	45.455	MGP_CASTEiJ_G0019962	Rslcan18	70	45.283
MGP_CASTEiJ_G0023809	Zfp236	68	43.590	MGP_CASTEiJ_G0032061	-	62	42.177
MGP_CASTEiJ_G0023809	Zfp236	68	43.590	MGP_CASTEiJ_G0032062	-	62	42.177
MGP_CASTEiJ_G0023809	Zfp236	66	45.205	MGP_CASTEiJ_G0030867	Zfp93	56	46.575
MGP_CASTEiJ_G0023809	Zfp236	90	50.000	MGP_CASTEiJ_G0032941	Sall1	67	53.704
MGP_CASTEiJ_G0023809	Zfp236	63	47.436	MGP_CASTEiJ_G0026290	Mynn	56	48.864
MGP_CASTEiJ_G0023809	Zfp236	94	46.939	MGP_CASTEiJ_G0022465	Zfp677	82	45.455
MGP_CASTEiJ_G0023809	Zfp236	69	45.283	MGP_CASTEiJ_G0022467	Zfp51	76	45.283
MGP_CASTEiJ_G0023809	Zfp236	67	45.122	MGP_CASTEiJ_G0019986	-	96	45.122
MGP_CASTEiJ_G0023809	Zfp236	97	42.735	MGP_CASTEiJ_G0029798	Repin1	99	41.667
MGP_CASTEiJ_G0023809	Zfp236	71	44.715	MGP_CASTEiJ_G0030265	Zfp637	85	51.807
MGP_CASTEiJ_G0023809	Zfp236	74	39.344	MGP_CASTEiJ_G0022489	Zscan10	99	37.143
MGP_CASTEiJ_G0023809	Zfp236	86	31.818	MGP_CASTEiJ_G0016511	Zbtb24	54	45.794
MGP_CASTEiJ_G0023809	Zfp236	74	34.409	MGP_CASTEiJ_G0015901	Zbtb41	61	38.824
MGP_CASTEiJ_G0023809	Zfp236	92	44.444	MGP_CASTEiJ_G0030966	Zfp59	90	42.857
MGP_CASTEiJ_G0023809	Zfp236	94	42.308	MGP_CASTEiJ_G0033000	Zfp319	87	40.690
MGP_CASTEiJ_G0023809	Zfp236	78	41.667	MGP_CASTEiJ_G0026106	Zfp64	70	42.500
MGP_CASTEiJ_G0023809	Zfp236	68	48.148	MGP_CASTEiJ_G0028956	Gfi1	100	46.739
MGP_CASTEiJ_G0023809	Zfp236	50	44.444	MGP_CASTEiJ_G0030644	-	66	44.643
MGP_CASTEiJ_G0023809	Zfp236	65	50.000	MGP_CASTEiJ_G0030869	Zfp94	76	42.647
MGP_CASTEiJ_G0023809	Zfp236	69	39.130	MGP_CASTEiJ_G0030868	Zfp61	57	47.727
MGP_CASTEiJ_G0023809	Zfp236	66	51.852	MGP_CASTEiJ_G0030861	Zfp112	52	42.742
MGP_CASTEiJ_G0023809	Zfp236	64	45.283	MGP_CASTEiJ_G0017568	Zfp454	95	42.697
MGP_CASTEiJ_G0023809	Zfp236	68	41.837	MGP_CASTEiJ_G0021271	Zfp251	71	40.833
MGP_CASTEiJ_G0023809	Zfp236	68	41.964	MGP_CASTEiJ_G0028178	Zbtb17	61	42.727
MGP_CASTEiJ_G0023809	Zfp236	77	43.860	MGP_CASTEiJ_G0029924	Prdm5	86	46.739
MGP_CASTEiJ_G0023809	Zfp236	66	48.936	MGP_CASTEiJ_G0031153	Zfp715	69	41.935
MGP_CASTEiJ_G0023809	Zfp236	71	40.157	MGP_CASTEiJ_G0017709	-	94	44.262
MGP_CASTEiJ_G0023809	Zfp236	68	47.191	MGP_CASTEiJ_G0032779	Zfp882	87	44.565
MGP_CASTEiJ_G0023809	Zfp236	69	42.609	MGP_CASTEiJ_G0032778	Zfp709	79	43.750
MGP_CASTEiJ_G0023809	Zfp236	93	40.179	MGP_CASTEiJ_G0019982	Zfp748	93	39.437
MGP_CASTEiJ_G0023809	Zfp236	71	46.296	MGP_CASTEiJ_G0033422	Zfp26	75	46.364
MGP_CASTEiJ_G0023809	Zfp236	91	42.991	MGP_CASTEiJ_G0031027	Zfp420	99	47.059
MGP_CASTEiJ_G0023809	Zfp236	81	53.333	MGP_CASTEiJ_G0026105	Sall4	73	53.333
MGP_CASTEiJ_G0023809	Zfp236	70	44.211	MGP_CASTEiJ_G0033485	Zfp872	78	46.316
MGP_CASTEiJ_G0023809	Zfp236	63	47.273	MGP_CASTEiJ_G0030635	Zfp628	61	42.500
MGP_CASTEiJ_G0023809	Zfp236	66	53.704	MGP_CASTEiJ_G0032059	Zfp768	53	45.536
MGP_CASTEiJ_G0023809	Zfp236	57	36.242	MGP_CASTEiJ_G0033238	Snai3	67	47.297
MGP_CASTEiJ_G0023809	Zfp236	68	43.590	MGP_CASTEiJ_G0032063	-	62	42.177
MGP_CASTEiJ_G0023809	Zfp236	67	43.810	MGP_CASTEiJ_G0030866	Zfp108	75	46.429
MGP_CASTEiJ_G0023809	Zfp236	65	47.059	MGP_CASTEiJ_G0017666	Zfp672	96	41.096
MGP_CASTEiJ_G0023809	Zfp236	69	44.643	MGP_CASTEiJ_G0030643	Zfp865	78	44.643
MGP_CASTEiJ_G0023809	Zfp236	52	49.057	MGP_CASTEiJ_G0030646	Zfp784	79	40.244
MGP_CASTEiJ_G0023809	Zfp236	71	41.228	MGP_CASTEiJ_G0032931	Zfp423	93	41.228
MGP_CASTEiJ_G0023809	Zfp236	73	46.835	MGP_CASTEiJ_G0019561	Zkscan4	56	50.000
MGP_CASTEiJ_G0023809	Zfp236	92	41.573	MGP_CASTEiJ_G0022483	Zfp945	77	45.349
MGP_CASTEiJ_G0023809	Zfp236	60	48.193	MGP_CASTEiJ_G0033155	Zfp1	67	48.193
MGP_CASTEiJ_G0023809	Zfp236	63	41.538	MGP_CASTEiJ_G0025643	Zfp661	69	42.857
MGP_CASTEiJ_G0023809	Zfp236	76	41.250	MGP_CASTEiJ_G0030898	Zfp574	65	41.304
MGP_CASTEiJ_G0023809	Zfp236	78	43.956	MGP_CASTEiJ_G0026068	Zfp334	68	44.545
MGP_CASTEiJ_G0023809	Zfp236	90	32.632	MGP_CASTEiJ_G0032086	Zfp646	91	38.554