EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0023877 (Gene tree)
Gene ID: -
Gene Symbol: Gm21992
Alias: Rbm14|Rbm14-rbm4|Rbm4 fusionGN
Full Name: predicted gene 21992
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 75643 bases
Position: chr19:1620898-1696540
Accession: 5439461
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0050294	zf-CCHC	PF00098.23	2.9e-07	1	1
MGP_CASTEiJ_P0050294	RRM_1	PF00076.22	1e-17	1	2
MGP_CASTEiJ_P0050294	RRM_1	PF00076.22	1e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0050286	-	2589	-	MGP_CASTEiJ_P0050286	118 (aa)	-	B0LM42
MGP_CASTEiJ_T0050298	-	2267	-	-	- (aa)	-	-
MGP_CASTEiJ_T0050295	-	456	-	MGP_CASTEiJ_P0050295	19 (aa)	-	-
MGP_CASTEiJ_T0050294	-	1435	-	MGP_CASTEiJ_P0050294	336 (aa)	-	-
MGP_CASTEiJ_T0050299	-	481	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0023877's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0023877's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0023877	Gm21992	90	31.061	MGP_CASTEiJ_G0016822	-	78	30.147
MGP_CASTEiJ_G0023877	Gm21992	100	96.610	MGP_CASTEiJ_G0023880	Rbm14	99	96.610
MGP_CASTEiJ_G0023877	Gm21992	100	74.581	MGP_CASTEiJ_G0023879	Rbm4	99	75.211
MGP_CASTEiJ_G0023877	Gm21992	100	61.050	MGP_CASTEiJ_G0023878	Rbm4b	99	61.602