EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0023878 (Gene tree)
Gene ID: -
Gene Symbol: Rbm4b
Alias: 4921506I22Rik|AI504630|AI506404|Lark2|Neosin|Rbm30
Full Name: RNA binding motif protein 4B
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 10603 bases
Position: chr19:1636158-1646760
Accession: 1913954
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0050290	zf-CCHC	PF00098.23	3.3e-07	1	1
MGP_CASTEiJ_P0050290	RRM_5	PF13893.6	3.6e-08	1	2
MGP_CASTEiJ_P0050290	RRM_5	PF13893.6	3.6e-08	2	2
MGP_CASTEiJ_P0050290	RRM_1	PF00076.22	1.4e-34	1	2
MGP_CASTEiJ_P0050290	RRM_1	PF00076.22	1.4e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0050291	-	5656	-	-	- (aa)	-	-
MGP_CASTEiJ_T0050287	-	1443	-	-	- (aa)	-	-
MGP_CASTEiJ_T0050292	-	407	-	-	- (aa)	-	-
MGP_CASTEiJ_T0050290	-	1783	-	MGP_CASTEiJ_P0050290	357 (aa)	-	-
MGP_CASTEiJ_T0050288	-	1209	-	-	- (aa)	-	-
MGP_CASTEiJ_T0050289	-	4175	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0023878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0023878's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0023878	Rbm4b	100	97.163	MGP_CASTEiJ_G0023879	Rbm4	100	97.163
MGP_CASTEiJ_G0023878	Rbm4b	99	61.602	MGP_CASTEiJ_G0023877	Gm21992	100	61.050