EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0023899 (Gene tree)
Gene ID: -
Gene Symbol: Rab1b
Alias: 1110011F09Rik|Rab1B
Full Name: RAB1B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 7792 bases
Position: chr19:2002732-2010523
Accession: 1923558
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0050338	MMR_HSR1	PF01926.23	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0050338	-	1835	-	MGP_CASTEiJ_P0050338	201 (aa)	-	Q9D1G1

Gene Model

Click here to download MGP_CASTEiJ_G0023899's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0023899's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0023899	Rab1b	82	35.329	MGP_CASTEiJ_G0034164	Mras	80	35.329
MGP_CASTEiJ_G0023899	Rab1b	79	40.373	MGP_CASTEiJ_G0018075	Rab34	62	40.373
MGP_CASTEiJ_G0023899	Rab1b	82	50.909	MGP_CASTEiJ_G0019160	Rab15	78	50.909
MGP_CASTEiJ_G0023899	Rab1b	99	39.810	MGP_CASTEiJ_G0034827	Rab39b	99	39.810
MGP_CASTEiJ_G0023899	Rab1b	97	34.848	MGP_CASTEiJ_G0030093	Rab7	100	39.241
MGP_CASTEiJ_G0023899	Rab1b	96	37.879	MGP_CASTEiJ_G0034188	Rab6b	93	37.879
MGP_CASTEiJ_G0023899	Rab1b	96	38.021	MGP_CASTEiJ_G0026136	Rab22a	97	38.021
MGP_CASTEiJ_G0023899	Rab1b	97	41.837	MGP_CASTEiJ_G0018675	Rab37	89	41.837
MGP_CASTEiJ_G0023899	Rab1b	58	34.746	MGP_CASTEiJ_G0015866	Arl8a	61	34.746
MGP_CASTEiJ_G0023899	Rab1b	87	45.198	MGP_CASTEiJ_G0017200	Rab5b	82	45.198
MGP_CASTEiJ_G0023899	Rab1b	58	31.933	MGP_CASTEiJ_G0019000	Arl4a	59	31.933
MGP_CASTEiJ_G0023899	Rab1b	58	33.058	MGP_CASTEiJ_G0023957	Arl2	61	33.058
MGP_CASTEiJ_G0023899	Rab1b	81	37.805	MGP_CASTEiJ_G0026847	Nras	96	37.671
MGP_CASTEiJ_G0023899	Rab1b	84	49.704	MGP_CASTEiJ_G0023193	Rab12	58	49.704
MGP_CASTEiJ_G0023899	Rab1b	83	34.337	MGP_CASTEiJ_G0015254	Rab23	70	34.337
MGP_CASTEiJ_G0023899	Rab1b	99	42.439	MGP_CASTEiJ_G0026561	Rab25	96	42.439
MGP_CASTEiJ_G0023899	Rab1b	82	36.970	MGP_CASTEiJ_G0030551	Kras	93	35.227
MGP_CASTEiJ_G0023899	Rab1b	77	38.994	MGP_CASTEiJ_G0035073	Rab9b	79	38.994
MGP_CASTEiJ_G0023899	Rab1b	81	63.580	MGP_CASTEiJ_G0029079	Rab35	100	53.465
MGP_CASTEiJ_G0023899	Rab1b	98	43.961	MGP_CASTEiJ_G0024846	Rab14	93	48.571
MGP_CASTEiJ_G0023899	Rab1b	99	48.095	MGP_CASTEiJ_G0022763	Rab11b	96	48.095
MGP_CASTEiJ_G0023899	Rab1b	96	44.845	MGP_CASTEiJ_G0023338	Rab18	93	44.845
MGP_CASTEiJ_G0023899	Rab1b	81	46.429	MGP_CASTEiJ_G0034658	Rab33a	71	46.429
MGP_CASTEiJ_G0023899	Rab1b	96	38.342	MGP_CASTEiJ_G0023184	Rab31	97	38.342
MGP_CASTEiJ_G0023899	Rab1b	86	32.759	MGP_CASTEiJ_G0028465	Rheb	93	32.759
MGP_CASTEiJ_G0023899	Rab1b	84	55.357	MGP_CASTEiJ_G0033947	Rab11a	97	52.201
MGP_CASTEiJ_G0023899	Rab1b	83	50.000	MGP_CASTEiJ_G0031541	Rab30	82	50.000
MGP_CASTEiJ_G0023899	Rab1b	58	32.203	MGP_CASTEiJ_G0030189	Arl8b	61	32.203
MGP_CASTEiJ_G0023899	Rab1b	96	44.330	MGP_CASTEiJ_G0018472	Rab5c	89	44.330
MGP_CASTEiJ_G0023899	Rab1b	100	40.097	MGP_CASTEiJ_G0026366	Rab33b	89	40.097
MGP_CASTEiJ_G0023899	Rab1b	86	34.463	MGP_CASTEiJ_G0032241	Hras	93	34.463
MGP_CASTEiJ_G0023899	Rab1b	77	38.994	MGP_CASTEiJ_G0035224	Rab9	79	38.994
MGP_CASTEiJ_G0023899	Rab1b	86	50.000	MGP_CASTEiJ_G0027193	Rab2a	99	44.762
MGP_CASTEiJ_G0023899	Rab1b	97	33.649	MGP_CASTEiJ_G0016681	Rab36	79	33.649
MGP_CASTEiJ_G0023899	Rab1b	98	45.327	MGP_CASTEiJ_G0020554	Rab2b	99	45.327
MGP_CASTEiJ_G0023899	Rab1b	58	31.092	MGP_CASTEiJ_G0015639	Arl4c	61	31.092
MGP_CASTEiJ_G0023899	Rab1b	96	46.429	MGP_CASTEiJ_G0023094	Rab5a	90	46.429
MGP_CASTEiJ_G0023899	Rab1b	57	31.092	MGP_CASTEiJ_G0026458	Arl14	59	31.092
MGP_CASTEiJ_G0023899	Rab1b	100	92.079	MGP_CASTEiJ_G0017380	Rab1a	99	92.079
MGP_CASTEiJ_G0023899	Rab1b	76	37.908	MGP_CASTEiJ_G0021498	Rabl2	67	37.908