EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0023963 (Gene tree)
Gene ID: -
Gene Symbol: Ehd1
Alias: AA409636|Past1|RME-1
Full Name: EH-domain containing 1
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 23150 bases
Position: chr19:3277630-3300779
Accession: 1341878
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0050550	MMR_HSR1	PF01926.23	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0050552	-	791	-	-	- (aa)	-	-
MGP_CASTEiJ_T0050553	-	349	-	-	- (aa)	-	-
MGP_CASTEiJ_T0050550	-	3363	-	MGP_CASTEiJ_P0050550	534 (aa)	-	Q9WVK4
MGP_CASTEiJ_T0050551	-	629	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0023963's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0023963's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0023963	Ehd1	99	86.466	MGP_CASTEiJ_G0023225	Ehd3	99	86.466
MGP_CASTEiJ_G0023963	Ehd1	99	75.140	MGP_CASTEiJ_G0025542	Ehd4	99	75.140
MGP_CASTEiJ_G0023963	Ehd1	67	33.973	MGP_CASTEiJ_G0021723	Srl	77	33.973
MGP_CASTEiJ_G0023963	Ehd1	100	70.872	MGP_CASTEiJ_G0030747	Ehd2	100	85.714