EuRBPDB

Description

Ensembl ID: MGP_CASTEiJ_G0024207 (Gene tree)
Gene ID: -
Gene Symbol: Smarca2
Alias: 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 189897 bases
Position: chr19:24228145-24418041
Accession: 99603
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0051220	ResIII	PF04851.15	4e-08	1	1
MGP_CASTEiJ_P0051221	ResIII	PF04851.15	4.1e-08	1	1
MGP_CASTEiJ_P0051224	ResIII	PF04851.15	2.1e-06	1	1
MGP_CASTEiJ_P0051224	BRK	PF07533.16	4.4e-17	1	1
MGP_CASTEiJ_P0051220	BRK	PF07533.16	4.5e-17	1	1
MGP_CASTEiJ_P0051221	BRK	PF07533.16	4.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0051237	-	1467	-	MGP_CASTEiJ_P0051237	113 (aa)	-	-
MGP_CASTEiJ_T0051238	-	974	-	MGP_CASTEiJ_P0051238	119 (aa)	-	-
MGP_CASTEiJ_T0051239	-	736	-	MGP_CASTEiJ_P0051239	119 (aa)	-	-
MGP_CASTEiJ_T0051229	-	426	-	-	- (aa)	-	-
MGP_CASTEiJ_T0051228	-	867	-	-	- (aa)	-	-
MGP_CASTEiJ_T0051227	-	1584	-	-	- (aa)	-	-
MGP_CASTEiJ_T0051226	-	654	-	-	- (aa)	-	-
MGP_CASTEiJ_T0051225	-	648	-	MGP_CASTEiJ_P0051225	174 (aa)	-	-
MGP_CASTEiJ_T0051224	-	4581	-	MGP_CASTEiJ_P0051224	1526 (aa)	-	-
MGP_CASTEiJ_T0051223	-	6006	-	MGP_CASTEiJ_P0051223	1593 (aa)	-	-
MGP_CASTEiJ_T0051222	-	5923	-	MGP_CASTEiJ_P0051222	1511 (aa)	-	-
MGP_CASTEiJ_T0051221	-	5872	-	MGP_CASTEiJ_P0051221	1602 (aa)	-	-
MGP_CASTEiJ_T0051220	-	5868	XM_006527281	MGP_CASTEiJ_P0051220	1584 (aa)	XP_006527344	A0A140LHE2
MGP_CASTEiJ_T0051234	-	1865	-	MGP_CASTEiJ_P0051234	236 (aa)	-	-
MGP_CASTEiJ_T0051231	-	942	-	MGP_CASTEiJ_P0051231	254 (aa)	-	-
MGP_CASTEiJ_T0051230	-	929	-	MGP_CASTEiJ_P0051230	254 (aa)	-	-
MGP_CASTEiJ_T0051232	-	788	-	MGP_CASTEiJ_P0051232	224 (aa)	-	-
MGP_CASTEiJ_T0051235	-	835	-	MGP_CASTEiJ_P0051235	235 (aa)	-	-
MGP_CASTEiJ_T0051233	-	879	-	MGP_CASTEiJ_P0051233	276 (aa)	-	-
MGP_CASTEiJ_T0051236	-	496	-	MGP_CASTEiJ_P0051236	83 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0024207	Smarca2	92	75.597	MGP_CASTEiJ_G0033463	Smarca4	92	79.812