EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0024277 (Gene tree)
Gene ID: -
Gene Symbol: Cpeb3
Alias: 4831444O18Rik|CPE-BP3|mKIAA0940
Full Name: cytoplasmic polyadenylation element binding protein 3
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 204089 bases
Position: chr19:35275571-35479659
Accession: 2443075
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0051441	RRM_1	PF00076.22	8e-12	1	1
MGP_CASTEiJ_P0051446	RRM_1	PF00076.22	3.1e-11	1	1
MGP_CASTEiJ_P0051444	RRM_1	PF00076.22	3.1e-11	1	1
MGP_CASTEiJ_P0051442	RRM_1	PF00076.22	3.2e-11	1	1
MGP_CASTEiJ_P0051440	RRM_1	PF00076.22	3.4e-11	1	1
MGP_CASTEiJ_P0051443	RRM_1	PF00076.22	3.4e-11	1	1
MGP_CASTEiJ_P0051445	RRM_1	PF00076.22	3.4e-11	1	1
MGP_CASTEiJ_P0051447	RRM_1	PF00076.22	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0051450	-	665	-	MGP_CASTEiJ_P0051450	117 (aa)	-	-
MGP_CASTEiJ_T0051451	-	450	-	MGP_CASTEiJ_P0051451	95 (aa)	-	-
MGP_CASTEiJ_T0051449	-	557	-	MGP_CASTEiJ_P0051449	127 (aa)	-	-
MGP_CASTEiJ_T0051448	-	660	-	MGP_CASTEiJ_P0051448	179 (aa)	-	-
MGP_CASTEiJ_T0051447	-	2096	-	MGP_CASTEiJ_P0051447	561 (aa)	-	-
MGP_CASTEiJ_T0051446	-	2411	-	MGP_CASTEiJ_P0051446	685 (aa)	-	-
MGP_CASTEiJ_T0051445	-	3148	-	MGP_CASTEiJ_P0051445	716 (aa)	-	-
MGP_CASTEiJ_T0051444	-	4228	-	MGP_CASTEiJ_P0051444	693 (aa)	-	-
MGP_CASTEiJ_T0051443	-	5672	-	MGP_CASTEiJ_P0051443	716 (aa)	-	-
MGP_CASTEiJ_T0051442	-	5261	-	MGP_CASTEiJ_P0051442	699 (aa)	-	-
MGP_CASTEiJ_T0051441	-	4839	-	MGP_CASTEiJ_P0051441	415 (aa)	-	-
MGP_CASTEiJ_T0051440	-	5927	XM_006526829	MGP_CASTEiJ_P0051440	716 (aa)	XP_006526892	Q7TN99

Gene Model

Click here to download MGP_CASTEiJ_G0024277's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0024277's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0024277	Cpeb3	100	75.418	MGP_CASTEiJ_G0017440	Cpeb4	99	80.250
MGP_CASTEiJ_G0024277	Cpeb3	100	78.037	MGP_CASTEiJ_G0028629	Cpeb2	99	61.736