EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0024528 (Gene tree)
Gene ID: -
Gene Symbol: Celf2
Alias: B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|ETR-3|Etr-3|Napor|Napor-2|mETR-3
Full Name: CUGBP%2C Elav-like family member 2
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 994546 bases
Position: chr2:3662152-4656697
Accession: 1338822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0052301	RRM_1	PF00076.22	2.6e-51	1	3
MGP_CASTEiJ_P0052301	RRM_1	PF00076.22	2.6e-51	2	3
MGP_CASTEiJ_P0052301	RRM_1	PF00076.22	2.6e-51	3	3
MGP_CASTEiJ_P0052303	RRM_1	PF00076.22	2.6e-51	1	3
MGP_CASTEiJ_P0052303	RRM_1	PF00076.22	2.6e-51	2	3
MGP_CASTEiJ_P0052303	RRM_1	PF00076.22	2.6e-51	3	3
MGP_CASTEiJ_P0052310	RRM_1	PF00076.22	2.7e-51	1	3
MGP_CASTEiJ_P0052310	RRM_1	PF00076.22	2.7e-51	2	3
MGP_CASTEiJ_P0052310	RRM_1	PF00076.22	2.7e-51	3	3
MGP_CASTEiJ_P0052312	RRM_1	PF00076.22	2.7e-51	1	3
MGP_CASTEiJ_P0052312	RRM_1	PF00076.22	2.7e-51	2	3
MGP_CASTEiJ_P0052312	RRM_1	PF00076.22	2.7e-51	3	3
MGP_CASTEiJ_P0052311	RRM_1	PF00076.22	2.7e-51	1	3
MGP_CASTEiJ_P0052311	RRM_1	PF00076.22	2.7e-51	2	3
MGP_CASTEiJ_P0052311	RRM_1	PF00076.22	2.7e-51	3	3
MGP_CASTEiJ_P0052307	RRM_1	PF00076.22	3.2e-51	1	3
MGP_CASTEiJ_P0052307	RRM_1	PF00076.22	3.2e-51	2	3
MGP_CASTEiJ_P0052307	RRM_1	PF00076.22	3.2e-51	3	3
MGP_CASTEiJ_P0052302	RRM_1	PF00076.22	3.3e-51	1	3
MGP_CASTEiJ_P0052302	RRM_1	PF00076.22	3.3e-51	2	3
MGP_CASTEiJ_P0052302	RRM_1	PF00076.22	3.3e-51	3	3
MGP_CASTEiJ_P0052305	RRM_1	PF00076.22	3.3e-51	1	3
MGP_CASTEiJ_P0052305	RRM_1	PF00076.22	3.3e-51	2	3
MGP_CASTEiJ_P0052305	RRM_1	PF00076.22	3.3e-51	3	3
MGP_CASTEiJ_P0052308	RRM_1	PF00076.22	3.5e-51	1	3
MGP_CASTEiJ_P0052308	RRM_1	PF00076.22	3.5e-51	2	3
MGP_CASTEiJ_P0052308	RRM_1	PF00076.22	3.5e-51	3	3
MGP_CASTEiJ_P0052309	RRM_1	PF00076.22	5e-39	1	3
MGP_CASTEiJ_P0052309	RRM_1	PF00076.22	5e-39	2	3
MGP_CASTEiJ_P0052309	RRM_1	PF00076.22	5e-39	3	3
MGP_CASTEiJ_P0052313	RRM_1	PF00076.22	6e-39	1	3
MGP_CASTEiJ_P0052313	RRM_1	PF00076.22	6e-39	2	3
MGP_CASTEiJ_P0052313	RRM_1	PF00076.22	6e-39	3	3
MGP_CASTEiJ_P0052304	RRM_1	PF00076.22	6.3e-39	1	3
MGP_CASTEiJ_P0052304	RRM_1	PF00076.22	6.3e-39	2	3
MGP_CASTEiJ_P0052304	RRM_1	PF00076.22	6.3e-39	3	3
MGP_CASTEiJ_P0052306	RRM_1	PF00076.22	6.7e-39	1	3
MGP_CASTEiJ_P0052306	RRM_1	PF00076.22	6.7e-39	2	3
MGP_CASTEiJ_P0052306	RRM_1	PF00076.22	6.7e-39	3	3
MGP_CASTEiJ_P0052320	RRM_1	PF00076.22	7.7e-19	1	1
MGP_CASTEiJ_P0052316	RRM_1	PF00076.22	2.5e-15	1	1
MGP_CASTEiJ_P0052323	RRM_1	PF00076.22	2.2e-14	1	1
MGP_CASTEiJ_P0052325	RRM_1	PF00076.22	1.1e-13	1	1
MGP_CASTEiJ_P0052326	RRM_1	PF00076.22	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0052328	-	769	-	-	- (aa)	-	-
MGP_CASTEiJ_T0052323	-	402	-	MGP_CASTEiJ_P0052323	92 (aa)	-	-
MGP_CASTEiJ_T0052322	-	2079	-	-	- (aa)	-	-
MGP_CASTEiJ_T0052321	-	4804	-	-	- (aa)	-	-
MGP_CASTEiJ_T0052320	-	630	-	MGP_CASTEiJ_P0052320	134 (aa)	-	-
MGP_CASTEiJ_T0052327	-	1925	-	-	- (aa)	-	-
MGP_CASTEiJ_T0052326	-	331	-	MGP_CASTEiJ_P0052326	46 (aa)	-	-
MGP_CASTEiJ_T0052325	-	529	-	MGP_CASTEiJ_P0052325	159 (aa)	-	-
MGP_CASTEiJ_T0052324	-	4143	-	-	- (aa)	-	-
MGP_CASTEiJ_T0052301	-	7669	XM_006497333	MGP_CASTEiJ_P0052301	484 (aa)	XP_006497396	Q9Z0H4
MGP_CASTEiJ_T0052303	-	7442	-	MGP_CASTEiJ_P0052303	484 (aa)	-	-
MGP_CASTEiJ_T0052302	-	8669	-	MGP_CASTEiJ_P0052302	526 (aa)	-	-
MGP_CASTEiJ_T0052305	-	5454	-	MGP_CASTEiJ_P0052305	526 (aa)	-	-
MGP_CASTEiJ_T0052304	-	8786	-	MGP_CASTEiJ_P0052304	478 (aa)	-	-
MGP_CASTEiJ_T0052307	-	3559	-	MGP_CASTEiJ_P0052307	508 (aa)	-	-
MGP_CASTEiJ_T0052306	-	3843	-	MGP_CASTEiJ_P0052306	472 (aa)	-	-
MGP_CASTEiJ_T0052309	-	2224	-	MGP_CASTEiJ_P0052309	440 (aa)	-	-
MGP_CASTEiJ_T0052308	-	2526	-	MGP_CASTEiJ_P0052308	520 (aa)	-	-
MGP_CASTEiJ_T0052316	-	1024	-	MGP_CASTEiJ_P0052316	276 (aa)	-	-
MGP_CASTEiJ_T0052317	-	4791	-	-	- (aa)	-	-
MGP_CASTEiJ_T0052314	-	1993	-	MGP_CASTEiJ_P0052314	442 (aa)	-	-
MGP_CASTEiJ_T0052315	-	1240	-	-	- (aa)	-	-
MGP_CASTEiJ_T0052312	-	2311	-	MGP_CASTEiJ_P0052312	488 (aa)	-	-
MGP_CASTEiJ_T0052313	-	2156	-	MGP_CASTEiJ_P0052313	460 (aa)	-	-
MGP_CASTEiJ_T0052310	-	1721	-	MGP_CASTEiJ_P0052310	488 (aa)	-	-
MGP_CASTEiJ_T0052311	-	2317	-	MGP_CASTEiJ_P0052311	490 (aa)	-	-
MGP_CASTEiJ_T0052318	-	405	-	-	- (aa)	-	-
MGP_CASTEiJ_T0052319	-	923	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0024528's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0024528's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0024528	Celf2	59	37.500	MGP_CASTEiJ_G0027867	Pabpc4	99	30.657
MGP_CASTEiJ_G0024528	Celf2	79	80.952	MGP_CASTEiJ_G0033906	Celf6	91	45.567
MGP_CASTEiJ_G0024528	Celf2	100	88.060	MGP_CASTEiJ_G0025323	Celf1	100	80.082
MGP_CASTEiJ_G0024528	Celf2	92	53.659	MGP_CASTEiJ_G0016890	Celf5	93	59.770
MGP_CASTEiJ_G0024528	Celf2	90	55.556	MGP_CASTEiJ_G0023416	Celf4	96	45.992
MGP_CASTEiJ_G0024528	Celf2	82	34.667	MGP_CASTEiJ_G0033478	Elavl3	73	40.741
MGP_CASTEiJ_G0024528	Celf2	94	83.333	MGP_CASTEiJ_G0026707	Celf3	90	55.801
MGP_CASTEiJ_G0024528	Celf2	87	33.333	MGP_CASTEiJ_G0027579	Elavl2	83	39.506
MGP_CASTEiJ_G0024528	Celf2	98	32.353	MGP_CASTEiJ_G0025058	Rbm45	59	31.818
MGP_CASTEiJ_G0024528	Celf2	61	35.714	MGP_CASTEiJ_G0015387	Boll	57	32.000
MGP_CASTEiJ_G0024528	Celf2	57	34.211	MGP_CASTEiJ_G0022384	Pabpc6	51	34.211
MGP_CASTEiJ_G0024528	Celf2	82	33.333	MGP_CASTEiJ_G0016816	Cirbp	80	32.558
MGP_CASTEiJ_G0024528	Celf2	61	34.177	MGP_CASTEiJ_G0032110	Tial1	65	31.481
MGP_CASTEiJ_G0024528	Celf2	57	34.884	MGP_CASTEiJ_G0026012	Pabpc1l	53	34.884
MGP_CASTEiJ_G0024528	Celf2	77	39.474	MGP_CASTEiJ_G0034390	Rbms3	75	37.079
MGP_CASTEiJ_G0024528	Celf2	88	32.099	MGP_CASTEiJ_G0034713	Rbmx	78	30.000
MGP_CASTEiJ_G0024528	Celf2	52	40.789	MGP_CASTEiJ_G0024960	Rbms1	73	40.789
MGP_CASTEiJ_G0024528	Celf2	61	38.272	MGP_CASTEiJ_G0027708	Elavl4	81	38.272
MGP_CASTEiJ_G0024528	Celf2	51	35.443	MGP_CASTEiJ_G0030063	Tia1	83	35.443