EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0024562 (Gene tree)
Gene ID: -
Gene Symbol: Arl5b
Alias: 4930587A11Rik|AW146430|Arl8
Full Name: ADP-ribosylation factor-like 5B
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 33119 bases
Position: chr2:12431032-12464150
Accession: 1923119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0052541	MMR_HSR1	PF01926.23	8.7e-07	1	1
MGP_CASTEiJ_P0052543	MMR_HSR1	PF01926.23	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0052548	-	706	-	MGP_CASTEiJ_P0052548	56 (aa)	-	-
MGP_CASTEiJ_T0052543	-	6997	-	MGP_CASTEiJ_P0052543	180 (aa)	-	-
MGP_CASTEiJ_T0052541	-	6949	XM_017319316	MGP_CASTEiJ_P0052541	171 (aa)	XP_017174805	A0A0A6YWH0
MGP_CASTEiJ_T0052547	-	3210	-	-	- (aa)	-	-
MGP_CASTEiJ_T0052546	-	780	-	MGP_CASTEiJ_P0052546	30 (aa)	-	-
MGP_CASTEiJ_T0052545	-	476	-	MGP_CASTEiJ_P0052545	35 (aa)	-	-
MGP_CASTEiJ_T0052544	-	1037	-	MGP_CASTEiJ_P0052544	40 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0024562's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0024562's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0024562	Arl5b	97	74.286	MGP_CASTEiJ_G0018355	Arl5c	98	74.286
MGP_CASTEiJ_G0024562	Arl5b	92	37.126	MGP_CASTEiJ_G0026195	Arfrp1	84	40.196
MGP_CASTEiJ_G0024562	Arl5b	99	43.094	MGP_CASTEiJ_G0024407	Arl3	99	43.094
MGP_CASTEiJ_G0024562	Arl5b	92	39.506	MGP_CASTEiJ_G0022188	Arl6	89	39.157
MGP_CASTEiJ_G0024562	Arl5b	98	49.718	MGP_CASTEiJ_G0021565	Arf3	98	49.718
MGP_CASTEiJ_G0024562	Arl5b	96	37.500	MGP_CASTEiJ_G0026458	Arl14	90	37.500
MGP_CASTEiJ_G0024562	Arl5b	93	40.000	MGP_CASTEiJ_G0020697	Arl11	91	40.000
MGP_CASTEiJ_G0024562	Arl5b	94	43.373	MGP_CASTEiJ_G0019000	Arl4a	85	43.787
MGP_CASTEiJ_G0024562	Arl5b	65	34.211	MGP_CASTEiJ_G0019834	Arl10	55	34.211
MGP_CASTEiJ_G0024562	Arl5b	99	44.444	MGP_CASTEiJ_G0029606	Arf5	100	44.444
MGP_CASTEiJ_G0024562	Arl5b	67	30.952	MGP_CASTEiJ_G0026136	Rab22a	61	30.952
MGP_CASTEiJ_G0024562	Arl5b	90	42.593	MGP_CASTEiJ_G0015639	Arl4c	85	42.169
MGP_CASTEiJ_G0024562	Arl5b	83	30.667	MGP_CASTEiJ_G0030189	Arl8b	78	30.667
MGP_CASTEiJ_G0024562	Arl5b	84	33.562	MGP_CASTEiJ_G0015866	Arl8a	78	33.553
MGP_CASTEiJ_G0024562	Arl5b	93	51.572	MGP_CASTEiJ_G0016961	Arl1	96	50.286
MGP_CASTEiJ_G0024562	Arl5b	96	44.512	MGP_CASTEiJ_G0023957	Arl2	90	44.242