EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0024783 (Gene tree)
Gene ID: -
Gene Symbol: Fubp3
Alias: A330051M14Rik|AV006371|FBP3|Marta2
Full Name: far upstream element (FUSE) binding protein 3
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 44894 bases
Position: chr2:29540695-29585588
Accession: 2443699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0053831	KH_1	PF00013.29	1e-68	1	4
MGP_CASTEiJ_P0053831	KH_1	PF00013.29	1e-68	2	4
MGP_CASTEiJ_P0053831	KH_1	PF00013.29	1e-68	3	4
MGP_CASTEiJ_P0053831	KH_1	PF00013.29	1e-68	4	4
MGP_CASTEiJ_P0053835	KH_1	PF00013.29	1.1e-68	1	4
MGP_CASTEiJ_P0053835	KH_1	PF00013.29	1.1e-68	2	4
MGP_CASTEiJ_P0053835	KH_1	PF00013.29	1.1e-68	3	4
MGP_CASTEiJ_P0053835	KH_1	PF00013.29	1.1e-68	4	4
MGP_CASTEiJ_P0053838	KH_1	PF00013.29	7.8e-19	1	1
MGP_CASTEiJ_P0053834	KH_1	PF00013.29	8.3e-11	1	1
MGP_CASTEiJ_P0053831	KH_2	PF07650.17	7.9e-21	1	1
MGP_CASTEiJ_P0053835	KH_2	PF07650.17	8.2e-21	1	1
MGP_CASTEiJ_P0053838	KH_2	PF07650.17	1.5e-05	1	1
MGP_CASTEiJ_P0053839	DUF1897	PF09005.10	4.3e-09	1	2
MGP_CASTEiJ_P0053839	DUF1897	PF09005.10	4.3e-09	2	2
MGP_CASTEiJ_P0053840	DUF1897	PF09005.10	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0053841	-	2341	-	-	- (aa)	-	-
MGP_CASTEiJ_T0053840	-	437	-	MGP_CASTEiJ_P0053840	52 (aa)	-	-
MGP_CASTEiJ_T0053838	-	1073	-	MGP_CASTEiJ_P0053838	263 (aa)	-	-
MGP_CASTEiJ_T0053839	-	842	-	MGP_CASTEiJ_P0053839	103 (aa)	-	-
MGP_CASTEiJ_T0053834	-	425	-	MGP_CASTEiJ_P0053834	123 (aa)	-	-
MGP_CASTEiJ_T0053835	-	3686	-	MGP_CASTEiJ_P0053835	575 (aa)	-	-
MGP_CASTEiJ_T0053836	-	453	-	MGP_CASTEiJ_P0053836	83 (aa)	-	-
MGP_CASTEiJ_T0053837	-	908	-	MGP_CASTEiJ_P0053837	191 (aa)	-	-
MGP_CASTEiJ_T0053831	-	3308	XM_006498126	MGP_CASTEiJ_P0053831	569 (aa)	XP_006498189	A0A0A6YVV5
MGP_CASTEiJ_T0053832	-	372	-	MGP_CASTEiJ_P0053832	97 (aa)	-	-
MGP_CASTEiJ_T0053833	-	1909	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0024783's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0024783's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0024783	Fubp3	96	64.865	MGP_CASTEiJ_G0027142	Fubp1	94	59.406
MGP_CASTEiJ_G0024783	Fubp3	79	31.707	MGP_CASTEiJ_G0026703	Tdrkh	74	31.707
MGP_CASTEiJ_G0024783	Fubp3	70	36.000	MGP_CASTEiJ_G0034226	Pcbp4	83	36.000
MGP_CASTEiJ_G0024783	Fubp3	95	58.824	MGP_CASTEiJ_G0023154	Khsrp	84	48.682
MGP_CASTEiJ_G0024783	Fubp3	77	31.973	MGP_CASTEiJ_G0016721	Pcbp3	85	31.973
MGP_CASTEiJ_G0024783	Fubp3	88	32.370	MGP_CASTEiJ_G0030066	Pcbp1	60	31.169
MGP_CASTEiJ_G0024783	Fubp3	58	30.000	MGP_CASTEiJ_G0021927	Igf2bp2	66	30.000