EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0024893 (Gene tree)
Gene ID: -
Gene Symbol: Strbp
Alias: 6430510M02Rik|AI852513|C230082I21Rik|C86322|Spnr
Full Name: spermatid perinuclear RNA binding protein
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 236324 bases
Position: chr2:35681789-35918112
Accession: 104626
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0054408	DZF	PF07528.14	1.2e-79	1	1
MGP_CASTEiJ_P0054411	DZF	PF07528.14	1.2e-79	1	1
MGP_CASTEiJ_P0054413	DZF	PF07528.14	2e-10	1	1
MGP_CASTEiJ_P0054414	DZF	PF07528.14	1.6e-05	1	1
MGP_CASTEiJ_P0054408	dsrm	PF00035.26	1.5e-25	1	2
MGP_CASTEiJ_P0054408	dsrm	PF00035.26	1.5e-25	2	2
MGP_CASTEiJ_P0054411	dsrm	PF00035.26	1.5e-25	1	2
MGP_CASTEiJ_P0054411	dsrm	PF00035.26	1.5e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0054402	-	2946	XM_011239043	MGP_CASTEiJ_P0054402	648 (aa)	XP_011237345	Q91WM1
MGP_CASTEiJ_T0054415	-	395	-	-	- (aa)	-	-
MGP_CASTEiJ_T0054414	-	746	-	MGP_CASTEiJ_P0054414	128 (aa)	-	-
MGP_CASTEiJ_T0054413	-	969	-	MGP_CASTEiJ_P0054413	167 (aa)	-	-
MGP_CASTEiJ_T0054412	-	1355	-	-	- (aa)	-	-
MGP_CASTEiJ_T0054411	-	3145	-	MGP_CASTEiJ_P0054411	672 (aa)	-	-
MGP_CASTEiJ_T0054410	-	355	-	MGP_CASTEiJ_P0054410	3 (aa)	-	-
MGP_CASTEiJ_T0054408	-	16363	-	MGP_CASTEiJ_P0054408	672 (aa)	-	-
MGP_CASTEiJ_T0054409	-	625	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0024893's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0024893	Strbp	98	38.037	MGP_CASTEiJ_G0016874	Zfr2	79	48.201
MGP_CASTEiJ_G0024893	Strbp	97	46.825	MGP_CASTEiJ_G0020993	Zfr	100	53.443
MGP_CASTEiJ_G0024893	Strbp	100	59.559	MGP_CASTEiJ_G0033455	Ilf3	98	57.391