EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0024915 (Gene tree)
Gene ID: -
Gene Symbol: Zeb2
Alias: 9130203F04Rik|D130016B08Rik|SIP1|Sip1|Zfhx1b|Zfx1b|Zfxh1b
Full Name: zinc finger E-box binding homeobox 2
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 140126 bases
Position: chr2:43545545-43685670
Accession: 1344407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0054535	zf-C2H2	PF00096.26	1.8e-24	1	5
MGP_CASTEiJ_P0054535	zf-C2H2	PF00096.26	1.8e-24	2	5
MGP_CASTEiJ_P0054535	zf-C2H2	PF00096.26	1.8e-24	3	5
MGP_CASTEiJ_P0054535	zf-C2H2	PF00096.26	1.8e-24	4	5
MGP_CASTEiJ_P0054535	zf-C2H2	PF00096.26	1.8e-24	5	5
MGP_CASTEiJ_P0054537	zf-C2H2	PF00096.26	2.2e-24	1	5
MGP_CASTEiJ_P0054537	zf-C2H2	PF00096.26	2.2e-24	2	5
MGP_CASTEiJ_P0054537	zf-C2H2	PF00096.26	2.2e-24	3	5
MGP_CASTEiJ_P0054537	zf-C2H2	PF00096.26	2.2e-24	4	5
MGP_CASTEiJ_P0054537	zf-C2H2	PF00096.26	2.2e-24	5	5
MGP_CASTEiJ_P0054531	zf-C2H2	PF00096.26	2.2e-24	1	5
MGP_CASTEiJ_P0054531	zf-C2H2	PF00096.26	2.2e-24	2	5
MGP_CASTEiJ_P0054531	zf-C2H2	PF00096.26	2.2e-24	3	5
MGP_CASTEiJ_P0054531	zf-C2H2	PF00096.26	2.2e-24	4	5
MGP_CASTEiJ_P0054531	zf-C2H2	PF00096.26	2.2e-24	5	5
MGP_CASTEiJ_P0054533	zf-C2H2	PF00096.26	2.2e-24	1	5
MGP_CASTEiJ_P0054533	zf-C2H2	PF00096.26	2.2e-24	2	5
MGP_CASTEiJ_P0054533	zf-C2H2	PF00096.26	2.2e-24	3	5
MGP_CASTEiJ_P0054533	zf-C2H2	PF00096.26	2.2e-24	4	5
MGP_CASTEiJ_P0054533	zf-C2H2	PF00096.26	2.2e-24	5	5
MGP_CASTEiJ_P0054536	zf-C2H2	PF00096.26	2.2e-24	1	5
MGP_CASTEiJ_P0054536	zf-C2H2	PF00096.26	2.2e-24	2	5
MGP_CASTEiJ_P0054536	zf-C2H2	PF00096.26	2.2e-24	3	5
MGP_CASTEiJ_P0054536	zf-C2H2	PF00096.26	2.2e-24	4	5
MGP_CASTEiJ_P0054536	zf-C2H2	PF00096.26	2.2e-24	5	5
MGP_CASTEiJ_P0054534	zf-C2H2	PF00096.26	3e-24	1	5
MGP_CASTEiJ_P0054534	zf-C2H2	PF00096.26	3e-24	2	5
MGP_CASTEiJ_P0054534	zf-C2H2	PF00096.26	3e-24	3	5
MGP_CASTEiJ_P0054534	zf-C2H2	PF00096.26	3e-24	4	5
MGP_CASTEiJ_P0054534	zf-C2H2	PF00096.26	3e-24	5	5
MGP_CASTEiJ_P0054538	zf-C2H2	PF00096.26	1.2e-17	1	4
MGP_CASTEiJ_P0054538	zf-C2H2	PF00096.26	1.2e-17	2	4
MGP_CASTEiJ_P0054538	zf-C2H2	PF00096.26	1.2e-17	3	4
MGP_CASTEiJ_P0054538	zf-C2H2	PF00096.26	1.2e-17	4	4
MGP_CASTEiJ_P0054532	zf-C2H2	PF00096.26	1.2e-15	1	3
MGP_CASTEiJ_P0054532	zf-C2H2	PF00096.26	1.2e-15	2	3
MGP_CASTEiJ_P0054532	zf-C2H2	PF00096.26	1.2e-15	3	3
MGP_CASTEiJ_P0054535	zf-met	PF12874.7	1.4e-06	1	1
MGP_CASTEiJ_P0054537	zf-met	PF12874.7	1.7e-06	1	1
MGP_CASTEiJ_P0054531	zf-met	PF12874.7	1.7e-06	1	1
MGP_CASTEiJ_P0054533	zf-met	PF12874.7	1.7e-06	1	1
MGP_CASTEiJ_P0054536	zf-met	PF12874.7	1.7e-06	1	1
MGP_CASTEiJ_P0054534	zf-met	PF12874.7	2.3e-06	1	1
MGP_CASTEiJ_P0054538	zf-met	PF12874.7	5.9e-05	1	2
MGP_CASTEiJ_P0054538	zf-met	PF12874.7	5.9e-05	2	2
MGP_CASTEiJ_P0054532	zf-met	PF12874.7	0.00042	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0054541	-	709	-	MGP_CASTEiJ_P0054541	184 (aa)	-	-
MGP_CASTEiJ_T0054540	-	240	-	MGP_CASTEiJ_P0054540	79 (aa)	-	-
MGP_CASTEiJ_T0054543	-	631	-	MGP_CASTEiJ_P0054543	141 (aa)	-	-
MGP_CASTEiJ_T0054542	-	453	-	-	- (aa)	-	-
MGP_CASTEiJ_T0054545	-	443	-	MGP_CASTEiJ_P0054545	113 (aa)	-	-
MGP_CASTEiJ_T0054544	-	618	-	-	- (aa)	-	-
MGP_CASTEiJ_T0054547	-	2910	-	-	- (aa)	-	-
MGP_CASTEiJ_T0054546	-	2657	-	-	- (aa)	-	-
MGP_CASTEiJ_T0054549	-	577	-	MGP_CASTEiJ_P0054549	63 (aa)	-	-
MGP_CASTEiJ_T0054548	-	550	-	MGP_CASTEiJ_P0054548	91 (aa)	-	-
MGP_CASTEiJ_T0054556	-	644	-	-	- (aa)	-	-
MGP_CASTEiJ_T0054557	-	3823	-	-	- (aa)	-	-
MGP_CASTEiJ_T0054554	-	2973	-	-	- (aa)	-	-
MGP_CASTEiJ_T0054555	-	370	-	-	- (aa)	-	-
MGP_CASTEiJ_T0054552	-	2592	-	-	- (aa)	-	-
MGP_CASTEiJ_T0054553	-	2674	-	-	- (aa)	-	-
MGP_CASTEiJ_T0054550	-	462	-	MGP_CASTEiJ_P0054550	83 (aa)	-	-
MGP_CASTEiJ_T0054551	-	2073	-	MGP_CASTEiJ_P0054551	37 (aa)	-	-
MGP_CASTEiJ_T0054558	-	432	-	-	- (aa)	-	-
MGP_CASTEiJ_T0054534	-	5337	-	MGP_CASTEiJ_P0054534	1259 (aa)	-	-
MGP_CASTEiJ_T0054535	-	4065	-	MGP_CASTEiJ_P0054535	1191 (aa)	-	-
MGP_CASTEiJ_T0054536	-	4021	-	MGP_CASTEiJ_P0054536	1215 (aa)	-	-
MGP_CASTEiJ_T0054537	-	3914	-	MGP_CASTEiJ_P0054537	1214 (aa)	-	-
MGP_CASTEiJ_T0054531	-	9134	XM_006498042	MGP_CASTEiJ_P0054531	1215 (aa)	XP_006498105	Q9R0G7
MGP_CASTEiJ_T0054532	-	1762	-	MGP_CASTEiJ_P0054532	220 (aa)	-	-
MGP_CASTEiJ_T0054533	-	5626	-	MGP_CASTEiJ_P0054533	1215 (aa)	-	-
MGP_CASTEiJ_T0054538	-	2236	-	MGP_CASTEiJ_P0054538	731 (aa)	-	-
MGP_CASTEiJ_T0054539	-	868	-	MGP_CASTEiJ_P0054539	214 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0024915's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0024915's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0024915	Zeb2	88	58.763	MGP_CASTEiJ_G0023333	Zeb1	97	57.491