EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CASTEiJ_G0025003 (Gene tree)
Gene ID
-
Gene Symbol
Ssb
Alias
La protein|SS-B|Ss-b|autoantigen La
Full Name
Sjogren syndrome antigen B
Gene Type
protein_coding
Species
Mus_musculus_casteij
Status
putative
Strand
Plus strand
Length
10279 bases
Position
chr2:69330455-69340733
Accession
98423
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CASTEiJ_P0055052RRM_1PF00076.224.1e-1211
MGP_CASTEiJ_P0055053RRM_1PF00076.224.1e-1211
MGP_CASTEiJ_P0055055RRM_1PF00076.227.2e-1011
MGP_CASTEiJ_P0055057RRM_3PF08777.112.8e-2811
MGP_CASTEiJ_P0055052RRM_3PF08777.117.4e-2811
MGP_CASTEiJ_P0055053RRM_3PF08777.117.4e-2811
MGP_CASTEiJ_P0055055LaPF05383.172.7e-2211
MGP_CASTEiJ_P0055052LaPF05383.177.8e-2211
MGP_CASTEiJ_P0055053LaPF05383.177.8e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CASTEiJ_T0055054-1563-MGP_CASTEiJ_P0055054159 (aa)--
MGP_CASTEiJ_T0055055-634-MGP_CASTEiJ_P0055055184 (aa)--
MGP_CASTEiJ_T0055056-666--- (aa)--
MGP_CASTEiJ_T0055057-991-MGP_CASTEiJ_P0055057229 (aa)--
MGP_CASTEiJ_T0055052-2001XM_006499069MGP_CASTEiJ_P0055052415 (aa)XP_006499132P32067
MGP_CASTEiJ_T0055053-2089-MGP_CASTEiJ_P0055053415 (aa)--
Gene Model
Click here to download MGP_CASTEiJ_G0025003's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0025003's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CASTEiJ_G0025003Ssb8433.333MGP_CASTEiJ_G0027017-6447.059

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