EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0025058 (Gene tree)
Gene ID: -
Gene Symbol: Rbm45
Alias: Drb1|Drbp1|G430095G15Rik
Full Name: RNA binding motif protein 45
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 13815 bases
Position: chr2:76303684-76317498
Accession: 2387367
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0055317	RRM_5	PF13893.6	1.7e-06	1	1
MGP_CASTEiJ_P0055317	RRM_1	PF00076.22	1.8e-48	1	4
MGP_CASTEiJ_P0055317	RRM_1	PF00076.22	1.8e-48	2	4
MGP_CASTEiJ_P0055317	RRM_1	PF00076.22	1.8e-48	3	4
MGP_CASTEiJ_P0055317	RRM_1	PF00076.22	1.8e-48	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0055318	-	1275	-	MGP_CASTEiJ_P0055318	290 (aa)	-	-
MGP_CASTEiJ_T0055317	-	1892	-	MGP_CASTEiJ_P0055317	476 (aa)	-	Q8BHN5

Gene Model

Click here to download MGP_CASTEiJ_G0025058's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0025058's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0025058	Rbm45	89	30.693	MGP_CASTEiJ_G0023416	Celf4	53	32.886
MGP_CASTEiJ_G0025058	Rbm45	88	32.886	MGP_CASTEiJ_G0027579	Elavl2	88	34.783
MGP_CASTEiJ_G0025058	Rbm45	92	30.909	MGP_CASTEiJ_G0027708	Elavl4	57	35.185
MGP_CASTEiJ_G0025058	Rbm45	59	31.818	MGP_CASTEiJ_G0024528	Celf2	98	32.353
MGP_CASTEiJ_G0025058	Rbm45	89	30.000	MGP_CASTEiJ_G0033906	Celf6	68	32.576