EuRBPDB

Description

Ensembl ID: MGP_CASTEiJ_G0025323 (Gene tree)
Gene ID: -
Gene Symbol: Celf1
Alias: 1600010O03Rik|AA407467|Brunol2|CUG-BP|CUG-BP1|CUGBP|Cugbp|Cugbp1|D2Wsu101e|HNAB50|NAB50
Full Name: CUGBP%2C Elav-like family member 1
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 80471 bases
Position: chr2:91797080-91877550
Accession: 1342295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0055905	RRM_1	PF00076.22	4.1e-52	1	3
MGP_CASTEiJ_P0055905	RRM_1	PF00076.22	4.1e-52	2	3
MGP_CASTEiJ_P0055905	RRM_1	PF00076.22	4.1e-52	3	3
MGP_CASTEiJ_P0055899	RRM_1	PF00076.22	4.3e-52	1	3
MGP_CASTEiJ_P0055899	RRM_1	PF00076.22	4.3e-52	2	3
MGP_CASTEiJ_P0055899	RRM_1	PF00076.22	4.3e-52	3	3
MGP_CASTEiJ_P0055904	RRM_1	PF00076.22	5.3e-52	1	3
MGP_CASTEiJ_P0055904	RRM_1	PF00076.22	5.3e-52	2	3
MGP_CASTEiJ_P0055904	RRM_1	PF00076.22	5.3e-52	3	3
MGP_CASTEiJ_P0055902	RRM_1	PF00076.22	6.8e-52	1	3
MGP_CASTEiJ_P0055902	RRM_1	PF00076.22	6.8e-52	2	3
MGP_CASTEiJ_P0055902	RRM_1	PF00076.22	6.8e-52	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0055902	-	7009	-	MGP_CASTEiJ_P0055902	543 (aa)	-	-
MGP_CASTEiJ_T0055903	-	271	-	-	- (aa)	-	-
MGP_CASTEiJ_T0055900	-	426	-	-	- (aa)	-	-
MGP_CASTEiJ_T0055901	-	478	-	-	- (aa)	-	-
MGP_CASTEiJ_T0055906	-	487	-	-	- (aa)	-	-
MGP_CASTEiJ_T0055904	-	7580	-	MGP_CASTEiJ_P0055904	513 (aa)	-	-
MGP_CASTEiJ_T0055905	-	4433	-	MGP_CASTEiJ_P0055905	483 (aa)	-	-
MGP_CASTEiJ_T0055898	-	350	-	-	- (aa)	-	-
MGP_CASTEiJ_T0055899	-	7852	-	MGP_CASTEiJ_P0055899	487 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0025323	Celf1	62	40.741	MGP_CASTEiJ_G0027708	Elavl4	78	40.741
MGP_CASTEiJ_G0025323	Celf1	57	37.879	MGP_CASTEiJ_G0026358	Pabpc4l	65	34.211
MGP_CASTEiJ_G0025323	Celf1	52	35.526	MGP_CASTEiJ_G0022384	Pabpc6	53	35.526
MGP_CASTEiJ_G0025323	Celf1	98	44.650	MGP_CASTEiJ_G0016890	Celf5	93	56.322
MGP_CASTEiJ_G0025323	Celf1	70	38.636	MGP_CASTEiJ_G0027867	Pabpc4	86	32.258
MGP_CASTEiJ_G0025323	Celf1	69	41.975	MGP_CASTEiJ_G0027579	Elavl2	85	41.975
MGP_CASTEiJ_G0025323	Celf1	100	45.200	MGP_CASTEiJ_G0023416	Celf4	100	42.430
MGP_CASTEiJ_G0025323	Celf1	53	42.105	MGP_CASTEiJ_G0024960	Rbms1	61	42.105
MGP_CASTEiJ_G0025323	Celf1	57	43.590	MGP_CASTEiJ_G0033478	Elavl3	71	42.391
MGP_CASTEiJ_G0025323	Celf1	97	43.408	MGP_CASTEiJ_G0026707	Celf3	89	53.804
MGP_CASTEiJ_G0025323	Celf1	100	80.082	MGP_CASTEiJ_G0024528	Celf2	100	88.060
MGP_CASTEiJ_G0025323	Celf1	53	43.421	MGP_CASTEiJ_G0034390	Rbms3	68	43.421
MGP_CASTEiJ_G0025323	Celf1	98	45.135	MGP_CASTEiJ_G0033906	Celf6	91	45.549