EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0025369 (Gene tree)
Gene ID: -
Gene Symbol: Alkbh3
Alias: 1700108H04Rik|1810020C19Rik|Abh3|mABH3
Full Name: alkB homolog 3%2C alpha-ketoglutarate-dependent dioxygenase
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 32330 bases
Position: chr2:95068749-95101078
Accession: 1916363
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0056216	2OG-FeII_Oxy_2	PF13532.6	2.1e-29	1	1
MGP_CASTEiJ_P0056214	2OG-FeII_Oxy_2	PF13532.6	2.1e-29	1	1
MGP_CASTEiJ_P0056219	2OG-FeII_Oxy_2	PF13532.6	2.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0056221	-	965	-	-	- (aa)	-	-
MGP_CASTEiJ_T0056220	-	428	-	-	- (aa)	-	-
MGP_CASTEiJ_T0056222	-	765	-	-	- (aa)	-	-
MGP_CASTEiJ_T0056219	-	897	-	MGP_CASTEiJ_P0056219	202 (aa)	-	-
MGP_CASTEiJ_T0056218	-	705	-	-	- (aa)	-	-
MGP_CASTEiJ_T0056217	-	825	-	-	- (aa)	-	-
MGP_CASTEiJ_T0056216	-	1229	-	MGP_CASTEiJ_P0056216	286 (aa)	-	-
MGP_CASTEiJ_T0056215	-	461	-	-	- (aa)	-	-
MGP_CASTEiJ_T0056214	-	1396	-	MGP_CASTEiJ_P0056214	287 (aa)	-	-
MGP_CASTEiJ_T0056213	-	732	-	-	- (aa)	-	-
MGP_CASTEiJ_T0056212	-	680	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0025369's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0025369's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0025369	Alkbh3	66	38.660	MGP_CASTEiJ_G0029035	Alkbh2	80	38.660