EuRBPDB

Description

Ensembl ID: MGP_CASTEiJ_G0025393 (Gene tree)
Gene ID: -
Gene Symbol: Caprin1
Alias: AL022980|Caprin-1|Gpiap|Gpiap1|Gpip137|M11s1|MMGPIP137|Mmgpip137|P137|RNG105|Rng105|caprin-1|rng105
Full Name: cell cycle associated protein 1
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 37429 bases
Position: chr2:104958846-104996274
Accession: 1858234
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0056345	Caprin-1_C	PF12287.8	1.9e-136	1	1
MGP_CASTEiJ_P0056346	Caprin-1_C	PF12287.8	1.9e-136	1	1
MGP_CASTEiJ_P0056347	Caprin-1_C	PF12287.8	3.3e-90	1	1
MGP_CASTEiJ_P0056352	Caprin-1_C	PF12287.8	2.9e-25	1	1
MGP_CASTEiJ_P0056348	Caprin-1_C	PF12287.8	3.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0056349	-	817	-	-	- (aa)	-	-
MGP_CASTEiJ_T0056348	-	856	-	MGP_CASTEiJ_P0056348	93 (aa)	-	-
MGP_CASTEiJ_T0056358	-	391	-	-	- (aa)	-	-
MGP_CASTEiJ_T0056359	-	626	-	-	- (aa)	-	-
MGP_CASTEiJ_T0056356	-	555	-	-	- (aa)	-	-
MGP_CASTEiJ_T0056352	-	760	-	MGP_CASTEiJ_P0056352	253 (aa)	-	-
MGP_CASTEiJ_T0056354	-	475	-	-	- (aa)	-	-
MGP_CASTEiJ_T0056355	-	879	-	-	- (aa)	-	-
MGP_CASTEiJ_T0056345	-	6166	XM_006499902	MGP_CASTEiJ_P0056345	707 (aa)	XP_006499965	Q60865
MGP_CASTEiJ_T0056353	-	570	-	-	- (aa)	-	-
MGP_CASTEiJ_T0056350	-	936	-	-	- (aa)	-	-
MGP_CASTEiJ_T0056346	-	4068	-	MGP_CASTEiJ_P0056346	707 (aa)	-	-
MGP_CASTEiJ_T0056347	-	1923	-	MGP_CASTEiJ_P0056347	213 (aa)	-	-
MGP_CASTEiJ_T0056357	-	828	-	-	- (aa)	-	-
MGP_CASTEiJ_T0056351	-	808	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0025393	Caprin1	89	44.656	MGP_CASTEiJ_G0030578	Caprin2	91	38.415