EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0025632 (Gene tree)
Gene ID: -
Gene Symbol: Snrnp200
Alias: A330064G03Rik|Ascc3l1|BC011390|HELIC2|Kiaa0788|U5-200-KD|U5-200KD
Full Name: small nuclear ribonucleoprotein 200 (U5)
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 35926 bases
Position: chr2:129491857-129527782
Accession: 2444401
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0057372	ResIII	PF04851.15	3.2e-25	1	2
MGP_CASTEiJ_P0057372	ResIII	PF04851.15	3.2e-25	2	2
MGP_CASTEiJ_P0057372	DEAD	PF00270.29	4.2e-52	1	2
MGP_CASTEiJ_P0057372	DEAD	PF00270.29	4.2e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0057373	-	5241	-	MGP_CASTEiJ_P0057373	1650 (aa)	-	-
MGP_CASTEiJ_T0057372	-	6745	-	MGP_CASTEiJ_P0057372	2136 (aa)	-	-
MGP_CASTEiJ_T0057371	-	2896	-	-	- (aa)	-	-
MGP_CASTEiJ_T0057376	-	741	-	-	- (aa)	-	-
MGP_CASTEiJ_T0057375	-	722	-	-	- (aa)	-	-
MGP_CASTEiJ_T0057374	-	593	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0025632's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0025632	Snrnp200	86	42.051	MGP_CASTEiJ_G0016547	Ascc3	80	46.541