EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0025754 (Gene tree)
Gene ID: -
Gene Symbol: Snrpb2
Alias: 2810052G09Rik
Full Name: U2 small nuclear ribonucleoprotein B
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 10062 bases
Position: chr2:146073405-146083466
Accession: 104805
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0057911	RRM_5	PF13893.6	8.6e-07	1	2
MGP_CASTEiJ_P0057911	RRM_5	PF13893.6	8.6e-07	2	2
MGP_CASTEiJ_P0057911	RRM_1	PF00076.22	3e-25	1	2
MGP_CASTEiJ_P0057911	RRM_1	PF00076.22	3e-25	2	2
MGP_CASTEiJ_P0057913	RRM_1	PF00076.22	1.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0057913	-	636	-	MGP_CASTEiJ_P0057913	143 (aa)	-	-
MGP_CASTEiJ_T0057912	-	684	-	-	- (aa)	-	-
MGP_CASTEiJ_T0057911	-	2074	-	MGP_CASTEiJ_P0057911	225 (aa)	-	Q9CQI7
MGP_CASTEiJ_T0057915	-	1840	-	-	- (aa)	-	-
MGP_CASTEiJ_T0057914	-	589	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0025754's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0025754	Snrpb2	99	63.121	MGP_CASTEiJ_G0030942	Snrpa	97	55.235
MGP_CASTEiJ_G0025754	Snrpb2	99	51.601	MGP_CASTEiJ_G0034178	Gm5145	99	51.601