EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0025790 (Gene tree)
Gene ID: -
Gene Symbol: Gzf1
Alias: 8430437G08Rik|Zfp336|mGZF1
Full Name: GDNF-inducible zinc finger protein 1
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 12244 bases
Position: chr2:151937151-151949394
Accession: 1921783
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0058065	zf-C2H2	PF00096.26	3.2e-34	1	6
MGP_CASTEiJ_P0058065	zf-C2H2	PF00096.26	3.2e-34	2	6
MGP_CASTEiJ_P0058065	zf-C2H2	PF00096.26	3.2e-34	3	6
MGP_CASTEiJ_P0058065	zf-C2H2	PF00096.26	3.2e-34	4	6
MGP_CASTEiJ_P0058065	zf-C2H2	PF00096.26	3.2e-34	5	6
MGP_CASTEiJ_P0058065	zf-C2H2	PF00096.26	3.2e-34	6	6
MGP_CASTEiJ_P0058065	zf-met	PF12874.7	6.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0058066	-	701	-	MGP_CASTEiJ_P0058066	146 (aa)	-	-
MGP_CASTEiJ_T0058067	-	734	-	-	- (aa)	-	-
MGP_CASTEiJ_T0058065	-	4233	XM_006500304	MGP_CASTEiJ_P0058065	706 (aa)	XP_006500367	Q4VBD9

Gene Model

Click here to download MGP_CASTEiJ_G0025790's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0025790's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0025790	Gzf1	83	44.103	MGP_CASTEiJ_G0028615	Zbtb49	62	46.479
MGP_CASTEiJ_G0025790	Gzf1	55	37.415	MGP_CASTEiJ_G0026290	Mynn	57	46.193
MGP_CASTEiJ_G0025790	Gzf1	58	56.000	MGP_CASTEiJ_G0023809	Zfp236	58	43.636
MGP_CASTEiJ_G0025790	Gzf1	84	34.286	MGP_CASTEiJ_G0015901	Zbtb41	54	34.286
MGP_CASTEiJ_G0025790	Gzf1	64	37.349	MGP_CASTEiJ_G0034437	Zfp651	51	37.349
MGP_CASTEiJ_G0025790	Gzf1	57	41.176	MGP_CASTEiJ_G0019982	Zfp748	84	41.176
MGP_CASTEiJ_G0025790	Gzf1	83	39.568	MGP_CASTEiJ_G0028178	Zbtb17	78	39.568