EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0025904 (Gene tree)
Gene ID: -
Gene Symbol: Raly
Alias: AI663842|Merc
Full Name: hnRNP-associated with lethal yellow
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 83009 bases
Position: chr2:158349894-158432902
Accession: 97850
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0058435	RRM_1	PF00076.22	1.9e-12	1	1
MGP_CASTEiJ_P0058433	RRM_1	PF00076.22	3.9e-12	1	1
MGP_CASTEiJ_P0058432	RRM_1	PF00076.22	7.3e-12	1	1
MGP_CASTEiJ_P0058437	RRM_1	PF00076.22	7.3e-12	1	1
MGP_CASTEiJ_P0058438	RRM_1	PF00076.22	7.7e-12	1	1
MGP_CASTEiJ_P0058434	RRM_1	PF00076.22	8.2e-12	1	1
MGP_CASTEiJ_P0058436	RRM_1	PF00076.22	8.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0058440	-	402	-	-	- (aa)	-	-
MGP_CASTEiJ_T0058441	-	337	-	-	- (aa)	-	-
MGP_CASTEiJ_T0058439	-	1578	-	-	- (aa)	-	-
MGP_CASTEiJ_T0058438	-	1100	-	MGP_CASTEiJ_P0058438	298 (aa)	-	-
MGP_CASTEiJ_T0058433	-	851	-	MGP_CASTEiJ_P0058433	211 (aa)	-	-
MGP_CASTEiJ_T0058432	-	1709	XM_006499013	MGP_CASTEiJ_P0058432	296 (aa)	XP_006499076	Q64012
MGP_CASTEiJ_T0058435	-	546	-	MGP_CASTEiJ_P0058435	141 (aa)	-	-
MGP_CASTEiJ_T0058434	-	1759	-	MGP_CASTEiJ_P0058434	312 (aa)	-	-
MGP_CASTEiJ_T0058437	-	1747	-	MGP_CASTEiJ_P0058437	296 (aa)	-	-
MGP_CASTEiJ_T0058436	-	1802	-	MGP_CASTEiJ_P0058436	312 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0025904's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0025904's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0025904	Raly	54	35.526	MGP_CASTEiJ_G0025991	Srsf6	56	35.526
MGP_CASTEiJ_G0025904	Raly	51	32.500	MGP_CASTEiJ_G0034713	Rbmx	77	32.500
MGP_CASTEiJ_G0025904	Raly	72	74.757	MGP_CASTEiJ_G0020550	Hnrnpc	85	52.609