EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0026081 (Gene tree)
Gene ID: -
Gene Symbol: Stau1
Alias: 5830401L18Rik|AW549911|C85792|Stau
Full Name: staufen (RNA binding protein) homolog 1 (Drosophila)
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 53939 bases
Position: chr2:171298728-171352666
Accession: 1338864
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0059307	dsrm	PF00035.26	1.2e-26	1	2
MGP_CASTEiJ_P0059307	dsrm	PF00035.26	1.2e-26	2	2
MGP_CASTEiJ_P0059304	dsrm	PF00035.26	1.3e-26	1	2
MGP_CASTEiJ_P0059304	dsrm	PF00035.26	1.3e-26	2	2
MGP_CASTEiJ_P0059308	dsrm	PF00035.26	1.4e-26	1	2
MGP_CASTEiJ_P0059308	dsrm	PF00035.26	1.4e-26	2	2
MGP_CASTEiJ_P0059306	dsrm	PF00035.26	2.4e-23	1	2
MGP_CASTEiJ_P0059306	dsrm	PF00035.26	2.4e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0059314	-	341	-	-	- (aa)	-	-
MGP_CASTEiJ_T0059304	-	3568	XM_006499071	MGP_CASTEiJ_P0059304	489 (aa)	XP_006499134	Q9Z108
MGP_CASTEiJ_T0059305	-	3569	-	-	- (aa)	-	-
MGP_CASTEiJ_T0059306	-	2975	-	MGP_CASTEiJ_P0059306	495 (aa)	-	-
MGP_CASTEiJ_T0059307	-	2839	-	MGP_CASTEiJ_P0059307	485 (aa)	-	-
MGP_CASTEiJ_T0059313	-	788	-	-	- (aa)	-	-
MGP_CASTEiJ_T0059312	-	826	-	-	- (aa)	-	-
MGP_CASTEiJ_T0059311	-	862	-	-	- (aa)	-	-
MGP_CASTEiJ_T0059310	-	1513	-	MGP_CASTEiJ_P0059310	436 (aa)	-	-
MGP_CASTEiJ_T0059308	-	2859	-	MGP_CASTEiJ_P0059308	487 (aa)	-	-
MGP_CASTEiJ_T0059309	-	774	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0026081's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0026081's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0026081	Stau1	86	48.055	MGP_CASTEiJ_G0015207	Stau2	84	48.046
MGP_CASTEiJ_G0026081	Stau1	52	31.395	MGP_CASTEiJ_G0025060	Prkra	53	31.395