EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0026082 (Gene tree)
Gene ID: -
Gene Symbol: Ddx27
Alias: C86129
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 21693 bases
Position: chr2:171374220-171395912
Accession: 2385884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0059315	ResIII	PF04851.15	1.7e-06	1	1
MGP_CASTEiJ_P0059315	DEAD	PF00270.29	7.3e-45	1	1
MGP_CASTEiJ_P0059317	DEAD	PF00270.29	2.4e-18	1	1
MGP_CASTEiJ_P0059318	DEAD	PF00270.29	6.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0059320	-	649	-	-	- (aa)	-	-
MGP_CASTEiJ_T0059317	-	2158	-	MGP_CASTEiJ_P0059317	292 (aa)	-	-
MGP_CASTEiJ_T0059316	-	1750	-	MGP_CASTEiJ_P0059316	541 (aa)	-	-
MGP_CASTEiJ_T0059315	-	2714	XM_006499422	MGP_CASTEiJ_P0059315	760 (aa)	XP_006499485	Q921N6
MGP_CASTEiJ_T0059321	-	724	-	-	- (aa)	-	-
MGP_CASTEiJ_T0059319	-	264	-	-	- (aa)	-	-
MGP_CASTEiJ_T0059318	-	955	-	MGP_CASTEiJ_P0059318	310 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0026082's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0026082's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0026082	Ddx27	53	31.019	MGP_CASTEiJ_G0017334	Ddx56	98	33.065
MGP_CASTEiJ_G0026082	Ddx27	56	32.558	MGP_CASTEiJ_G0021336	Ddx17	56	33.880
MGP_CASTEiJ_G0026082	Ddx27	59	33.696	MGP_CASTEiJ_G0032713	Ddx49	97	38.286
MGP_CASTEiJ_G0026082	Ddx27	54	31.655	MGP_CASTEiJ_G0022856	Ddx39b	99	36.424
MGP_CASTEiJ_G0026082	Ddx27	51	35.938	MGP_CASTEiJ_G0019339	Ddx24	56	35.938
MGP_CASTEiJ_G0026082	Ddx27	52	34.129	MGP_CASTEiJ_G0016635	Ddx50	61	34.279
MGP_CASTEiJ_G0026082	Ddx27	53	38.221	MGP_CASTEiJ_G0015762	Ddx18	68	36.966