EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0026128 (Gene tree)
Gene ID: -
Gene Symbol: Rbm38
Alias: Rnpc1|Seb4|Seb4l
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 12938 bases
Position: chr2:177985601-177998538
Accession: 1889294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0059496	RRM_1	PF00076.22	1.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0059494	-	936	XM_006499923	MGP_CASTEiJ_P0059494	78 (aa)	XP_006499986	Q62176
MGP_CASTEiJ_T0059495	-	2280	-	-	- (aa)	-	-
MGP_CASTEiJ_T0059496	-	1639	-	MGP_CASTEiJ_P0059496	237 (aa)	-	-
MGP_CASTEiJ_T0059497	-	620	-	MGP_CASTEiJ_P0059497	107 (aa)	-	-
MGP_CASTEiJ_T0059498	-	440	-	MGP_CASTEiJ_P0059498	125 (aa)	-	-
MGP_CASTEiJ_T0059499	-	1527	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0026128's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0026128	Rbm38	74	38.043	MGP_CASTEiJ_G0016816	Cirbp	78	40.476
MGP_CASTEiJ_G0026128	Rbm38	66	46.809	MGP_CASTEiJ_G0029073	Msi1	61	51.064
MGP_CASTEiJ_G0026128	Rbm38	77	35.484	MGP_CASTEiJ_G0016822	-	86	35.802
MGP_CASTEiJ_G0026128	Rbm38	63	91.837	MGP_CASTEiJ_G0019776	Rbm24	100	68.067
MGP_CASTEiJ_G0026128	Rbm38	70	38.095	MGP_CASTEiJ_G0018234	Msi2	79	34.074