EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0026195 (Gene tree)
Gene ID: -
Gene Symbol: Arfrp1
Alias: 1500006I01Rik|AI480700
Full Name: ADP-ribosylation factor related protein 1
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 7324 bases
Position: chr2:184224890-184232213
Accession: 1923938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0059801	MMR_HSR1	PF01926.23	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0059804	-	656	-	MGP_CASTEiJ_P0059804	62 (aa)	-	-
MGP_CASTEiJ_T0059805	-	428	-	-	- (aa)	-	-
MGP_CASTEiJ_T0059806	-	549	-	-	- (aa)	-	-
MGP_CASTEiJ_T0059799	-	1816	-	-	- (aa)	-	-
MGP_CASTEiJ_T0059798	-	2185	-	-	- (aa)	-	-
MGP_CASTEiJ_T0059803	-	742	-	-	- (aa)	-	-
MGP_CASTEiJ_T0059802	-	835	-	-	- (aa)	-	-
MGP_CASTEiJ_T0059801	-	732	-	MGP_CASTEiJ_P0059801	201 (aa)	-	-
MGP_CASTEiJ_T0059800	-	1081	-	-	- (aa)	-	-
MGP_CASTEiJ_T0059797	-	2318	XM_011239965	MGP_CASTEiJ_P0059797	121 (aa)	XP_011238267	Q8BXL7

Gene Model

Click here to download MGP_CASTEiJ_G0026195's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0026195's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0026195	Arfrp1	92	40.000	MGP_CASTEiJ_G0024407	Arl3	96	40.000
MGP_CASTEiJ_G0026195	Arfrp1	84	35.577	MGP_CASTEiJ_G0026458	Arl14	83	34.911
MGP_CASTEiJ_G0026195	Arfrp1	84	40.196	MGP_CASTEiJ_G0024562	Arl5b	92	37.126
MGP_CASTEiJ_G0026195	Arfrp1	93	31.304	MGP_CASTEiJ_G0030189	Arl8b	74	31.724
MGP_CASTEiJ_G0026195	Arfrp1	87	35.185	MGP_CASTEiJ_G0029079	Rab35	59	32.576
MGP_CASTEiJ_G0026195	Arfrp1	93	33.929	MGP_CASTEiJ_G0022188	Arl6	92	30.387
MGP_CASTEiJ_G0026195	Arfrp1	90	38.393	MGP_CASTEiJ_G0029606	Arf5	94	34.225
MGP_CASTEiJ_G0026195	Arfrp1	91	40.000	MGP_CASTEiJ_G0019000	Arl4a	90	34.896
MGP_CASTEiJ_G0026195	Arfrp1	91	38.182	MGP_CASTEiJ_G0023957	Arl2	97	35.106
MGP_CASTEiJ_G0026195	Arfrp1	71	30.070	MGP_CASTEiJ_G0015866	Arl8a	73	30.070
MGP_CASTEiJ_G0026195	Arfrp1	93	37.931	MGP_CASTEiJ_G0021565	Arf3	96	33.333
MGP_CASTEiJ_G0026195	Arfrp1	85	34.286	MGP_CASTEiJ_G0015639	Arl4c	86	34.286
MGP_CASTEiJ_G0026195	Arfrp1	87	36.364	MGP_CASTEiJ_G0020697	Arl11	94	34.659
MGP_CASTEiJ_G0026195	Arfrp1	85	36.416	MGP_CASTEiJ_G0016961	Arl1	97	34.921
MGP_CASTEiJ_G0026195	Arfrp1	93	40.708	MGP_CASTEiJ_G0018355	Arl5c	96	37.705