EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CASTEiJ_G0026316 (Gene tree)
Gene ID
-
Gene Symbol
Fxr1
Alias
1110050J02Rik|9530073J07Rik|AI851072|Fxr1h|Fxr1p
Full Name
fragile X mental retardation gene 1%2C autosomal homolog
Gene Type
protein_coding
Species
Mus_musculus_casteij
Status
putative
Strand
Plus strand
Length
54379 bases
Position
chr3:31577740-31632118
Accession
104860
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CASTEiJ_P0060398KH_1PF00013.299.8e-1712
MGP_CASTEiJ_P0060398KH_1PF00013.299.8e-1722
MGP_CASTEiJ_P0060400KH_1PF00013.291.1e-1612
MGP_CASTEiJ_P0060400KH_1PF00013.291.1e-1622
MGP_CASTEiJ_P0060397KH_1PF00013.291.1e-1612
MGP_CASTEiJ_P0060397KH_1PF00013.291.1e-1622
MGP_CASTEiJ_P0060399KH_1PF00013.291.4e-1612
MGP_CASTEiJ_P0060399KH_1PF00013.291.4e-1622
MGP_CASTEiJ_P0060395KH_1PF00013.291.8e-1612
MGP_CASTEiJ_P0060395KH_1PF00013.291.8e-1622
MGP_CASTEiJ_P0060398AgenetPF05641.125.5e-1411
MGP_CASTEiJ_P0060397AgenetPF05641.126.5e-1411
MGP_CASTEiJ_P0060399AgenetPF05641.128.4e-1411
MGP_CASTEiJ_P0060395AgenetPF05641.121.1e-1311
MGP_CASTEiJ_P0060400AgenetPF05641.127.8e-1111
MGP_CASTEiJ_P0060400FXMRP1_C_corePF12235.83e-4611
MGP_CASTEiJ_P0060397FXMRP1_C_corePF12235.83.1e-4611
MGP_CASTEiJ_P0060395FXMRP1_C_corePF12235.84.2e-4611
MGP_CASTEiJ_P0060398FXMRP1_C_corePF12235.88.8e-2912
MGP_CASTEiJ_P0060398FXMRP1_C_corePF12235.88.8e-2922
MGP_CASTEiJ_P0060399FXMRP1_C_corePF12235.85.4e-2812
MGP_CASTEiJ_P0060399FXMRP1_C_corePF12235.85.4e-2822
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CASTEiJ_T0060402-646-MGP_CASTEiJ_P0060402132 (aa)--
MGP_CASTEiJ_T0060403-2479--- (aa)--
MGP_CASTEiJ_T0060399-2129-MGP_CASTEiJ_P0060399621 (aa)--
MGP_CASTEiJ_T0060398-3014-MGP_CASTEiJ_P0060398539 (aa)--
MGP_CASTEiJ_T0060397-2127-MGP_CASTEiJ_P0060397568 (aa)--
MGP_CASTEiJ_T0060396-2158-MGP_CASTEiJ_P006039654 (aa)--
MGP_CASTEiJ_T0060395-2413XM_006535400MGP_CASTEiJ_P0060395677 (aa)XP_006535463Q61584
MGP_CASTEiJ_T0060400-3118-MGP_CASTEiJ_P0060400559 (aa)--
MGP_CASTEiJ_T0060401-651--- (aa)--
Gene Model
Click here to download MGP_CASTEiJ_G0026316's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0026316's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CASTEiJ_G0026316Fxr19866.370MGP_CASTEiJ_G0017850Fxr29762.610
MGP_CASTEiJ_G0026316Fxr18073.620MGP_CASTEiJ_G0034736Fmr18465.139

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