EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0026493 (Gene tree)
Gene ID: -
Gene Symbol: Rbm46
Alias: EG633285|ENSMUSG00000033882|Gm761|LOC329687
Full Name: RNA binding motif protein 46
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 40967 bases
Position: chr3:82306928-82347894
Accession: 3645057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0061271	DND1_DSRM	PF14709.7	1.9e-27	1	1
MGP_CASTEiJ_P0061272	DND1_DSRM	PF14709.7	2.2e-27	1	1
MGP_CASTEiJ_P0061270	DND1_DSRM	PF14709.7	2.6e-27	1	1
MGP_CASTEiJ_P0061271	RRM_1	PF00076.22	9.1e-37	1	3
MGP_CASTEiJ_P0061271	RRM_1	PF00076.22	9.1e-37	2	3
MGP_CASTEiJ_P0061271	RRM_1	PF00076.22	9.1e-37	3	3
MGP_CASTEiJ_P0061272	RRM_1	PF00076.22	1e-36	1	3
MGP_CASTEiJ_P0061272	RRM_1	PF00076.22	1e-36	2	3
MGP_CASTEiJ_P0061272	RRM_1	PF00076.22	1e-36	3	3
MGP_CASTEiJ_P0061270	RRM_1	PF00076.22	1.5e-36	1	3
MGP_CASTEiJ_P0061270	RRM_1	PF00076.22	1.5e-36	2	3
MGP_CASTEiJ_P0061270	RRM_1	PF00076.22	1.5e-36	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0061272	-	2113	-	MGP_CASTEiJ_P0061272	485 (aa)	-	-
MGP_CASTEiJ_T0061271	-	2056	-	MGP_CASTEiJ_P0061271	470 (aa)	-	-
MGP_CASTEiJ_T0061270	-	1794	XM_006501849	MGP_CASTEiJ_P0061270	533 (aa)	XP_006501912	P86049

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0026493's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0026493	Rbm46	66	72.468	MGP_CASTEiJ_G0028695	Rbm47	94	73.649
MGP_CASTEiJ_G0026493	Rbm46	88	70.064	MGP_CASTEiJ_G0024240	A1cf	98	70.064
MGP_CASTEiJ_G0026493	Rbm46	52	30.000	MGP_CASTEiJ_G0032110	Tial1	73	32.000
MGP_CASTEiJ_G0026493	Rbm46	63	55.000	MGP_CASTEiJ_G0034108	Syncrip	53	54.333