EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0026561 (Gene tree)
Gene ID: -
Gene Symbol: Rab25
Alias: AV012978
Full Name: RAB25%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 6627 bases
Position: chr3:88331989-88338615
Accession: 1858203
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0061585	MMR_HSR1	PF01926.23	5.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0061588	-	865	-	-	- (aa)	-	-
MGP_CASTEiJ_T0061585	-	1081	XM_011240163	MGP_CASTEiJ_P0061585	213 (aa)	-	Q9WTL2
MGP_CASTEiJ_T0061587	-	301	-	-	- (aa)	-	-
MGP_CASTEiJ_T0061586	-	897	-	MGP_CASTEiJ_P0061586	138 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0026561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0026561's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0026561	Rab25	54	42.735	MGP_CASTEiJ_G0016681	Rab36	68	37.569
MGP_CASTEiJ_G0026561	Rab25	94	39.303	MGP_CASTEiJ_G0019160	Rab15	94	39.303
MGP_CASTEiJ_G0026561	Rab25	80	48.235	MGP_CASTEiJ_G0024846	Rab14	93	48.227
MGP_CASTEiJ_G0026561	Rab25	74	39.877	MGP_CASTEiJ_G0034658	Rab33a	69	39.877
MGP_CASTEiJ_G0026561	Rab25	75	39.157	MGP_CASTEiJ_G0030093	Rab7	91	44.944
MGP_CASTEiJ_G0026561	Rab25	79	45.833	MGP_CASTEiJ_G0017380	Rab1a	82	45.833
MGP_CASTEiJ_G0026561	Rab25	96	41.546	MGP_CASTEiJ_G0031541	Rab30	97	41.546
MGP_CASTEiJ_G0026561	Rab25	92	31.683	MGP_CASTEiJ_G0015254	Rab23	85	31.683
MGP_CASTEiJ_G0026561	Rab25	80	47.368	MGP_CASTEiJ_G0027193	Rab2a	99	42.056
MGP_CASTEiJ_G0026561	Rab25	100	61.435	MGP_CASTEiJ_G0022763	Rab11b	100	61.435
MGP_CASTEiJ_G0026561	Rab25	79	43.529	MGP_CASTEiJ_G0023338	Rab18	82	43.529
MGP_CASTEiJ_G0026561	Rab25	95	39.901	MGP_CASTEiJ_G0029079	Rab35	91	44.565
MGP_CASTEiJ_G0026561	Rab25	76	33.537	MGP_CASTEiJ_G0030551	Kras	98	31.746
MGP_CASTEiJ_G0026561	Rab25	93	40.704	MGP_CASTEiJ_G0023094	Rab5a	90	40.704
MGP_CASTEiJ_G0026561	Rab25	99	62.150	MGP_CASTEiJ_G0033947	Rab11a	95	70.748
MGP_CASTEiJ_G0026561	Rab25	79	43.275	MGP_CASTEiJ_G0034827	Rab39b	80	43.275
MGP_CASTEiJ_G0026561	Rab25	80	46.784	MGP_CASTEiJ_G0020554	Rab2b	81	48.408
MGP_CASTEiJ_G0026561	Rab25	96	42.439	MGP_CASTEiJ_G0023899	Rab1b	99	42.439
MGP_CASTEiJ_G0026561	Rab25	93	41.089	MGP_CASTEiJ_G0018472	Rab5c	89	41.089
MGP_CASTEiJ_G0026561	Rab25	70	32.000	MGP_CASTEiJ_G0032241	Hras	85	33.333
MGP_CASTEiJ_G0026561	Rab25	76	38.323	MGP_CASTEiJ_G0026366	Rab33b	73	38.323
MGP_CASTEiJ_G0026561	Rab25	68	30.519	MGP_CASTEiJ_G0018075	Rab34	61	30.519
MGP_CASTEiJ_G0026561	Rab25	74	30.380	MGP_CASTEiJ_G0021498	Rabl2	69	30.380
MGP_CASTEiJ_G0026561	Rab25	70	33.333	MGP_CASTEiJ_G0026847	Nras	95	33.793
MGP_CASTEiJ_G0026561	Rab25	93	39.899	MGP_CASTEiJ_G0023184	Rab31	97	39.899
MGP_CASTEiJ_G0026561	Rab25	93	34.314	MGP_CASTEiJ_G0035224	Rab9	97	34.314
MGP_CASTEiJ_G0026561	Rab25	93	35.859	MGP_CASTEiJ_G0026136	Rab22a	97	35.859
MGP_CASTEiJ_G0026561	Rab25	76	45.963	MGP_CASTEiJ_G0017200	Rab5b	75	45.963
MGP_CASTEiJ_G0026561	Rab25	79	40.588	MGP_CASTEiJ_G0023193	Rab12	58	40.588
MGP_CASTEiJ_G0026561	Rab25	93	32.323	MGP_CASTEiJ_G0034188	Rab6b	94	32.323
MGP_CASTEiJ_G0026561	Rab25	83	40.113	MGP_CASTEiJ_G0018675	Rab37	82	40.113
MGP_CASTEiJ_G0026561	Rab25	94	35.577	MGP_CASTEiJ_G0035073	Rab9b	98	35.577