EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0026703 (Gene tree)
Gene ID: -
Gene Symbol: Tdrkh
Alias: 2700091C21Rik|Tdrd2
Full Name: tudor and KH domain containing protein
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 24128 bases
Position: chr3:93828640-93852767
Accession: 1919884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0062139	KH_1	PF00013.29	2e-34	1	2
MGP_CASTEiJ_P0062139	KH_1	PF00013.29	2e-34	2	2
MGP_CASTEiJ_P0062137	KH_1	PF00013.29	1e-33	1	2
MGP_CASTEiJ_P0062137	KH_1	PF00013.29	1e-33	2	2
MGP_CASTEiJ_P0062136	KH_1	PF00013.29	1.2e-33	1	2
MGP_CASTEiJ_P0062136	KH_1	PF00013.29	1.2e-33	2	2
MGP_CASTEiJ_P0062140	KH_1	PF00013.29	1.2e-33	1	2
MGP_CASTEiJ_P0062140	KH_1	PF00013.29	1.2e-33	2	2
MGP_CASTEiJ_P0062141	KH_1	PF00013.29	1.2e-33	1	2
MGP_CASTEiJ_P0062141	KH_1	PF00013.29	1.2e-33	2	2
MGP_CASTEiJ_P0062143	KH_1	PF00013.29	5.9e-28	1	2
MGP_CASTEiJ_P0062143	KH_1	PF00013.29	5.9e-28	2	2
MGP_CASTEiJ_P0062142	KH_1	PF00013.29	3.1e-19	1	1
MGP_CASTEiJ_P0062142	TUDOR	PF00567.24	4.8e-29	1	1
MGP_CASTEiJ_P0062137	TUDOR	PF00567.24	5.1e-29	1	1
MGP_CASTEiJ_P0062143	TUDOR	PF00567.24	5.4e-29	1	1
MGP_CASTEiJ_P0062136	TUDOR	PF00567.24	5.5e-29	1	1
MGP_CASTEiJ_P0062140	TUDOR	PF00567.24	5.5e-29	1	1
MGP_CASTEiJ_P0062141	TUDOR	PF00567.24	5.5e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0062143	-	2584	-	MGP_CASTEiJ_P0062143	556 (aa)	-	-
MGP_CASTEiJ_T0062142	-	2474	-	MGP_CASTEiJ_P0062142	515 (aa)	-	-
MGP_CASTEiJ_T0062140	-	2650	-	MGP_CASTEiJ_P0062140	560 (aa)	-	-
MGP_CASTEiJ_T0062141	-	2640	-	MGP_CASTEiJ_P0062141	560 (aa)	-	-
MGP_CASTEiJ_T0062137	-	1685	-	MGP_CASTEiJ_P0062137	523 (aa)	-	-
MGP_CASTEiJ_T0062136	-	5695	XM_006502138	MGP_CASTEiJ_P0062136	560 (aa)	XP_006502201	Q80VL1
MGP_CASTEiJ_T0062139	-	1059	-	MGP_CASTEiJ_P0062139	296 (aa)	-	-
MGP_CASTEiJ_T0062138	-	476	-	MGP_CASTEiJ_P0062138	50 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0026703's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0026703	Tdrkh	52	30.625	MGP_CASTEiJ_G0029819	Igf2bp3	55	30.625
MGP_CASTEiJ_G0026703	Tdrkh	74	31.707	MGP_CASTEiJ_G0024783	Fubp3	79	31.707