EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0026783 (Gene tree)
Gene ID: -
Gene Symbol: Rbm8a
Alias: 2310057C03Rik|AA673428|Rbm8
Full Name: RNA binding motif protein 8a
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 3864 bases
Position: chr3:96181814-96185677
Accession: 1913129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0062523	RRM_1	PF00076.22	5.3e-18	1	1
MGP_CASTEiJ_P0062522	RRM_1	PF00076.22	5.7e-18	1	1
MGP_CASTEiJ_P0062524	RRM_1	PF00076.22	5.7e-18	1	1
MGP_CASTEiJ_P0062522	RRM_3	PF08777.11	3.8e-06	1	1
MGP_CASTEiJ_P0062524	RRM_3	PF08777.11	3.9e-06	1	1
MGP_CASTEiJ_P0062523	RRM_3	PF08777.11	8.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0062526	-	560	-	-	- (aa)	-	-
MGP_CASTEiJ_T0062524	-	2382	-	MGP_CASTEiJ_P0062524	174 (aa)	-	-
MGP_CASTEiJ_T0062525	-	464	-	-	- (aa)	-	-
MGP_CASTEiJ_T0062522	-	2612	-	MGP_CASTEiJ_P0062522	173 (aa)	-	Q9CWZ3
MGP_CASTEiJ_T0062523	-	2761	-	MGP_CASTEiJ_P0062523	171 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0026783's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0026783's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0026783	Rbm8a	62	30.693	MGP_CASTEiJ_G0027708	Elavl4	54	33.784
MGP_CASTEiJ_G0026783	Rbm8a	58	32.353	MGP_CASTEiJ_G0027579	Elavl2	59	33.784
MGP_CASTEiJ_G0026783	Rbm8a	57	31.313	MGP_CASTEiJ_G0034713	Rbmx	73	32.000
MGP_CASTEiJ_G0026783	Rbm8a	54	35.870	MGP_CASTEiJ_G0030063	Tia1	77	35.870
MGP_CASTEiJ_G0026783	Rbm8a	100	84.795	MGP_CASTEiJ_G0016187	Rbm8a2	87	90.789