EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0026800 (Gene tree)
Gene ID: -
Gene Symbol: Chd1l
Alias: 4432404A22Rik|Alc1|Snf2p
Full Name: chromodomain helicase DNA binding protein 1-like
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 50215 bases
Position: chr3:97201015-97251229
Accession: 1915308
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0062604	ResIII	PF04851.15	2.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0062603	-	2972	-	MGP_CASTEiJ_P0062603	894 (aa)	-	-
MGP_CASTEiJ_T0062602	-	854	XM_017319700	MGP_CASTEiJ_P0062602	243 (aa)	XP_017175189	Q9CXF7
MGP_CASTEiJ_T0062606	-	2948	-	-	- (aa)	-	-
MGP_CASTEiJ_T0062605	-	500	-	-	- (aa)	-	-
MGP_CASTEiJ_T0062604	-	3018	-	MGP_CASTEiJ_P0062604	902 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0026800's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0026800's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0026800	Chd1l	50	30.196	MGP_CASTEiJ_G0027207	Rad54b	56	30.724
MGP_CASTEiJ_G0026800	Chd1l	54	39.184	MGP_CASTEiJ_G0024296	Hells	68	39.184