EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0026876 (Gene tree)
Gene ID: -
Gene Symbol: Ddx20
Alias: Dp103|GEMIN3|Gemin3|dp103
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 20
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 9047 bases
Position: chr3:105690121-105699167
Accession: 1858415
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0062935	ResIII	PF04851.15	3.3e-06	1	1
MGP_CASTEiJ_P0062935	DEAD	PF00270.29	6.2e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0062935	-	2905	XM_006501701	MGP_CASTEiJ_P0062935	825 (aa)	XP_006501764	Q9JJY4
MGP_CASTEiJ_T0062937	-	2263	-	-	- (aa)	-	-
MGP_CASTEiJ_T0062936	-	1264	-	MGP_CASTEiJ_P0062936	139 (aa)	-	-
MGP_CASTEiJ_T0062938	-	586	-	MGP_CASTEiJ_P0062938	134 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0026876's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0026876's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0026876	Ddx20	50	32.854	MGP_CASTEiJ_G0033719	Ddx6	80	33.503
MGP_CASTEiJ_G0026876	Ddx20	50	34.140	MGP_CASTEiJ_G0032855	Ddx39	90	34.074