EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CASTEiJ_G0026983 (Gene tree)
Gene ID
-
Gene Symbol
Ptbp2
Alias
Brptb|Nptb|Ptb2|brPTB|nPTB
Full Name
polypyrimidine tract binding protein 2
Gene Type
protein_coding
Species
Mus_musculus_casteij
Status
putative
Strand
Minus strand
Length
67444 bases
Position
chr3:120545982-120613425
Accession
1860489
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CASTEiJ_P0063390RRM_5PF13893.67.4e-5313
MGP_CASTEiJ_P0063390RRM_5PF13893.67.4e-5323
MGP_CASTEiJ_P0063390RRM_5PF13893.67.4e-5333
MGP_CASTEiJ_P0063391RRM_5PF13893.68.9e-5212
MGP_CASTEiJ_P0063391RRM_5PF13893.68.9e-5222
MGP_CASTEiJ_P0063396RRM_5PF13893.63.5e-2011
MGP_CASTEiJ_P0063391RRM_1PF00076.225.4e-3313
MGP_CASTEiJ_P0063391RRM_1PF00076.225.4e-3323
MGP_CASTEiJ_P0063391RRM_1PF00076.225.4e-3333
MGP_CASTEiJ_P0063390RRM_1PF00076.221.9e-3213
MGP_CASTEiJ_P0063390RRM_1PF00076.221.9e-3223
MGP_CASTEiJ_P0063390RRM_1PF00076.221.9e-3233
MGP_CASTEiJ_P0063398RRM_1PF00076.222.2e-1011
MGP_CASTEiJ_P0063396RRM_1PF00076.220.0002311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CASTEiJ_T0063400-482--- (aa)--
MGP_CASTEiJ_T0063401-458--- (aa)--
MGP_CASTEiJ_T0063396-465-MGP_CASTEiJ_P0063396155 (aa)--
MGP_CASTEiJ_T0063397-4053--- (aa)--
MGP_CASTEiJ_T0063394-938--- (aa)--
MGP_CASTEiJ_T0063395-491--- (aa)--
MGP_CASTEiJ_T0063392-1564-MGP_CASTEiJ_P0063392344 (aa)--
MGP_CASTEiJ_T0063393-576-MGP_CASTEiJ_P006339333 (aa)--
MGP_CASTEiJ_T0063390-3334XM_006501731MGP_CASTEiJ_P0063390521 (aa)XP_006501794Q91Z31
MGP_CASTEiJ_T0063391-3749-MGP_CASTEiJ_P0063391520 (aa)--
MGP_CASTEiJ_T0063402-393-MGP_CASTEiJ_P006340249 (aa)--
MGP_CASTEiJ_T0063398-1721-MGP_CASTEiJ_P0063398230 (aa)--
MGP_CASTEiJ_T0063399-620--- (aa)--
Gene Model
Click here to download MGP_CASTEiJ_G0026983's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0026983's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CASTEiJ_G0026983Ptbp210067.384MGP_CASTEiJ_G0027475Ptbp39078.788
MGP_CASTEiJ_G0026983Ptbp27732.273MGP_CASTEiJ_G0031001Hnrnpl9330.097
MGP_CASTEiJ_G0026983Ptbp29930.357MGP_CASTEiJ_G0023258Hnrnpll6630.159

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