EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0027128 (Gene tree)
Gene ID: -
Gene Symbol: Rpf1
Alias: 2210420E24Rik|2310066N05Rik|Bxdc5
Full Name: ribosome production factor 1 homolog
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 15373 bases
Position: chr3:148848636-148864008
Accession: 1917535
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0064186	Brix	PF04427.18	8.5e-26	1	1
MGP_CASTEiJ_P0064187	Brix	PF04427.18	6.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0064188	-	813	-	-	- (aa)	-	-
MGP_CASTEiJ_T0064189	-	802	-	-	- (aa)	-	-
MGP_CASTEiJ_T0064186	-	1665	XM_006502050	MGP_CASTEiJ_P0064186	349 (aa)	XP_006502113	Q7TND5
MGP_CASTEiJ_T0064187	-	1120	-	MGP_CASTEiJ_P0064187	146 (aa)	-	-
MGP_CASTEiJ_T0064190	-	1977	-	MGP_CASTEiJ_P0064190	212 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0027128's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0027128's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0027128	Rpf1	87	40.625	MGP_CASTEiJ_G0015260	Imp4	71	37.321