EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0027142 (Gene tree)
Gene ID: -
Gene Symbol: Fubp1
Alias: 9530027K12Rik|D3Ertd330e|FBP|Fubp|Fubp4
Full Name: far upstream element (FUSE) binding protein 1
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 26311 bases
Position: chr3:154882108-154908418
Accession: 1196294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0064276	KH_1	PF00013.29	9.4e-70	1	4
MGP_CASTEiJ_P0064276	KH_1	PF00013.29	9.4e-70	2	4
MGP_CASTEiJ_P0064276	KH_1	PF00013.29	9.4e-70	3	4
MGP_CASTEiJ_P0064276	KH_1	PF00013.29	9.4e-70	4	4
MGP_CASTEiJ_P0064273	KH_1	PF00013.29	2.9e-69	1	4
MGP_CASTEiJ_P0064273	KH_1	PF00013.29	2.9e-69	2	4
MGP_CASTEiJ_P0064273	KH_1	PF00013.29	2.9e-69	3	4
MGP_CASTEiJ_P0064273	KH_1	PF00013.29	2.9e-69	4	4
MGP_CASTEiJ_P0064279	KH_1	PF00013.29	2.9e-69	1	4
MGP_CASTEiJ_P0064279	KH_1	PF00013.29	2.9e-69	2	4
MGP_CASTEiJ_P0064279	KH_1	PF00013.29	2.9e-69	3	4
MGP_CASTEiJ_P0064279	KH_1	PF00013.29	2.9e-69	4	4
MGP_CASTEiJ_P0064277	KH_1	PF00013.29	3.1e-69	1	4
MGP_CASTEiJ_P0064277	KH_1	PF00013.29	3.1e-69	2	4
MGP_CASTEiJ_P0064277	KH_1	PF00013.29	3.1e-69	3	4
MGP_CASTEiJ_P0064277	KH_1	PF00013.29	3.1e-69	4	4
MGP_CASTEiJ_P0064275	KH_1	PF00013.29	3.2e-69	1	4
MGP_CASTEiJ_P0064275	KH_1	PF00013.29	3.2e-69	2	4
MGP_CASTEiJ_P0064275	KH_1	PF00013.29	3.2e-69	3	4
MGP_CASTEiJ_P0064275	KH_1	PF00013.29	3.2e-69	4	4
MGP_CASTEiJ_P0064274	KH_1	PF00013.29	7.7e-38	1	2
MGP_CASTEiJ_P0064274	KH_1	PF00013.29	7.7e-38	2	2
MGP_CASTEiJ_P0064283	KH_1	PF00013.29	1.3e-16	1	1
MGP_CASTEiJ_P0064276	KH_2	PF07650.17	1.2e-22	1	2
MGP_CASTEiJ_P0064276	KH_2	PF07650.17	1.2e-22	2	2
MGP_CASTEiJ_P0064279	KH_2	PF07650.17	3.1e-22	1	2
MGP_CASTEiJ_P0064279	KH_2	PF07650.17	3.1e-22	2	2
MGP_CASTEiJ_P0064277	KH_2	PF07650.17	3.3e-22	1	2
MGP_CASTEiJ_P0064277	KH_2	PF07650.17	3.3e-22	2	2
MGP_CASTEiJ_P0064275	KH_2	PF07650.17	3.4e-22	1	2
MGP_CASTEiJ_P0064275	KH_2	PF07650.17	3.4e-22	2	2
MGP_CASTEiJ_P0064273	KH_2	PF07650.17	3.4e-22	1	2
MGP_CASTEiJ_P0064273	KH_2	PF07650.17	3.4e-22	2	2
MGP_CASTEiJ_P0064274	KH_2	PF07650.17	3.9e-10	1	1
MGP_CASTEiJ_P0064283	KH_2	PF07650.17	3.5e-06	1	1
MGP_CASTEiJ_P0064287	DUF1897	PF09005.10	1.7e-12	1	2
MGP_CASTEiJ_P0064287	DUF1897	PF09005.10	1.7e-12	2	2
MGP_CASTEiJ_P0064285	DUF1897	PF09005.10	2.1e-12	1	2
MGP_CASTEiJ_P0064285	DUF1897	PF09005.10	2.1e-12	2	2
MGP_CASTEiJ_P0064273	DUF1897	PF09005.10	2.5e-11	1	2
MGP_CASTEiJ_P0064273	DUF1897	PF09005.10	2.5e-11	2	2
MGP_CASTEiJ_P0064279	DUF1897	PF09005.10	2.5e-11	1	2
MGP_CASTEiJ_P0064279	DUF1897	PF09005.10	2.5e-11	2	2
MGP_CASTEiJ_P0064277	DUF1897	PF09005.10	2.6e-11	1	2
MGP_CASTEiJ_P0064277	DUF1897	PF09005.10	2.6e-11	2	2
MGP_CASTEiJ_P0064275	DUF1897	PF09005.10	2.7e-11	1	2
MGP_CASTEiJ_P0064275	DUF1897	PF09005.10	2.7e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0064274	-	1040	-	MGP_CASTEiJ_P0064274	306 (aa)	-	-
MGP_CASTEiJ_T0064275	-	2553	-	MGP_CASTEiJ_P0064275	654 (aa)	-	-
MGP_CASTEiJ_T0064276	-	3212	-	MGP_CASTEiJ_P0064276	523 (aa)	-	-
MGP_CASTEiJ_T0064277	-	2527	-	MGP_CASTEiJ_P0064277	651 (aa)	-	-
MGP_CASTEiJ_T0064273	-	6548	XM_006501660	MGP_CASTEiJ_P0064273	642 (aa)	XP_006501723	Q91WJ8
MGP_CASTEiJ_T0064281	-	4520	-	MGP_CASTEiJ_P0064281	642 (aa)	-	-
MGP_CASTEiJ_T0064280	-	4848	-	MGP_CASTEiJ_P0064280	700 (aa)	-	-
MGP_CASTEiJ_T0064283	-	585	-	MGP_CASTEiJ_P0064283	149 (aa)	-	-
MGP_CASTEiJ_T0064282	-	433	-	-	- (aa)	-	-
MGP_CASTEiJ_T0064278	-	2095	-	MGP_CASTEiJ_P0064278	69 (aa)	-	-
MGP_CASTEiJ_T0064279	-	2375	-	MGP_CASTEiJ_P0064279	643 (aa)	-	-
MGP_CASTEiJ_T0064287	-	815	-	MGP_CASTEiJ_P0064287	156 (aa)	-	-
MGP_CASTEiJ_T0064284	-	515	-	-	- (aa)	-	-
MGP_CASTEiJ_T0064291	-	665	-	-	- (aa)	-	-
MGP_CASTEiJ_T0064289	-	424	-	-	- (aa)	-	-
MGP_CASTEiJ_T0064290	-	3994	-	-	- (aa)	-	-
MGP_CASTEiJ_T0064288	-	5099	-	-	- (aa)	-	-
MGP_CASTEiJ_T0064286	-	801	-	MGP_CASTEiJ_P0064286	173 (aa)	-	-
MGP_CASTEiJ_T0064285	-	797	-	MGP_CASTEiJ_P0064285	141 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0027142's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0027142's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0027142	Fubp1	72	33.019	MGP_CASTEiJ_G0016721	Pcbp3	66	31.250
MGP_CASTEiJ_G0027142	Fubp1	96	64.410	MGP_CASTEiJ_G0023154	Khsrp	70	67.654
MGP_CASTEiJ_G0027142	Fubp1	53	34.615	MGP_CASTEiJ_G0019896	Hnrnpk	57	34.615
MGP_CASTEiJ_G0027142	Fubp1	50	36.364	MGP_CASTEiJ_G0019013	Nova1	57	36.364
MGP_CASTEiJ_G0027142	Fubp1	72	34.524	MGP_CASTEiJ_G0034226	Pcbp4	76	33.684
MGP_CASTEiJ_G0027142	Fubp1	61	36.765	MGP_CASTEiJ_G0030795	-	54	36.765
MGP_CASTEiJ_G0027142	Fubp1	69	30.168	MGP_CASTEiJ_G0030794	-	53	36.765
MGP_CASTEiJ_G0027142	Fubp1	94	59.406	MGP_CASTEiJ_G0024783	Fubp3	96	64.865