EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0027214 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 1833 bases
Position: chr4:8798162-8799994
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0064707	RRM_1	PF00076.22	1.1e-66	1	4
MGP_CASTEiJ_P0064707	RRM_1	PF00076.22	1.1e-66	2	4
MGP_CASTEiJ_P0064707	RRM_1	PF00076.22	1.1e-66	3	4
MGP_CASTEiJ_P0064707	RRM_1	PF00076.22	1.1e-66	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0064707	-	1833	-	MGP_CASTEiJ_P0064707	531 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0027214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0027214's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0027214	-	94	50.725	MGP_CASTEiJ_G0023577	Pabpc2	86	50.725
MGP_CASTEiJ_G0027214	-	58	68.644	MGP_CASTEiJ_G0026358	Pabpc4l	96	68.644
MGP_CASTEiJ_G0027214	-	94	50.691	MGP_CASTEiJ_G0022384	Pabpc6	86	50.691
MGP_CASTEiJ_G0027214	-	57	34.884	MGP_CASTEiJ_G0024960	Rbms1	52	34.884
MGP_CASTEiJ_G0027214	-	58	61.864	MGP_CASTEiJ_G0035010	Pabpc5	97	61.864
MGP_CASTEiJ_G0027214	-	94	72.029	MGP_CASTEiJ_G0027867	Pabpc4	87	72.029
MGP_CASTEiJ_G0027214	-	94	48.780	MGP_CASTEiJ_G0026012	Pabpc1l	88	48.780
MGP_CASTEiJ_G0027214	-	55	30.579	MGP_CASTEiJ_G0032110	Tial1	73	32.099
MGP_CASTEiJ_G0027214	-	57	35.526	MGP_CASTEiJ_G0025604	Myef2	54	35.526
MGP_CASTEiJ_G0027214	-	94	81.373	MGP_CASTEiJ_G0021054	Pabpc1	84	81.373
MGP_CASTEiJ_G0027214	-	57	34.884	MGP_CASTEiJ_G0034390	Rbms3	72	34.884